Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,438,904	-				+0.2
3,438,904	-				-0.0
3,438,909	-				-1.4
3,438,909	-				-0.9
3,439,000	+				+0.0
3,439,026	+				+0.2
3,439,026	+				-2.0
3,439,026	+				-0.3
3,439,027	-				+0.0
3,439,027	-				+0.6
3,439,027	-				+0.6
3,439,027	-				-0.3
3,439,027	-				+0.0
3,439,027	-				+1.8
3,439,027	-				-1.4
3,439,027	-				-1.4
3,439,027	-				+0.8
3,439,027	-				-1.0
3,439,046	+				+0.9
3,439,050	+				+1.5
3,439,050	+				-1.4
3,439,050	+				-0.6
3,439,050	+				-0.4
3,439,050	+				-0.1
3,439,051	-				-0.0
3,439,051	-				+0.6
3,439,069	+				+0.5
3,439,070	-				-0.6
3,439,070	-				-1.6
3,439,073	+				+0.7
3,439,074	-				+0.2
3,439,091	+				+0.5
3,439,091	+				-0.1
3,439,092	-				-1.1
3,439,092	-				-0.4
3,439,092	-				-1.6
3,439,092	-				-0.9
3,439,092	-				-0.2
3,439,121	-				-0.4
3,439,134	-				+0.9
3,439,134	-				-2.2
3,439,134	-				-0.3
3,439,134	-				-0.2
3,439,275	+				+1.3
3,439,346	-		DDA3937_RS14985	0.38	-0.6
3,439,375	-		DDA3937_RS14985	0.43	+0.5
3,439,391	+		DDA3937_RS14985	0.45	-0.2
3,439,391	+		DDA3937_RS14985	0.45	-0.3
3,439,391	+		DDA3937_RS14985	0.45	-0.7
3,439,391	+		DDA3937_RS14985	0.45	-0.3
3,439,392	-		DDA3937_RS14985	0.45	-1.1
3,439,392	-		DDA3937_RS14985	0.45	-0.2
3,439,392	-		DDA3937_RS14985	0.45	+0.6
3,439,410	+		DDA3937_RS14985	0.48	-1.5
3,439,411	-		DDA3937_RS14985	0.48	-0.3
3,439,411	-		DDA3937_RS14985	0.48	+0.5
3,439,467	+		DDA3937_RS14985	0.56	+0.0
3,439,468	-		DDA3937_RS14985	0.56	-0.2
3,439,519	-		DDA3937_RS14985	0.64	+0.2
3,439,519	-		DDA3937_RS14985	0.64	-1.1
3,439,564	+		DDA3937_RS14985	0.70	-0.7
3,439,564	+		DDA3937_RS14985	0.70	+0.4
3,439,564	+		DDA3937_RS14985	0.70	-1.0
3,439,635	-		DDA3937_RS14985	0.80	+0.4
3,439,639	-		DDA3937_RS14985	0.81	+0.4
3,439,653	+		DDA3937_RS14985	0.83	-0.4
3,439,653	+		DDA3937_RS14985	0.83	-0.5
3,439,653	+		DDA3937_RS14985	0.83	-0.4
3,439,766	+				+0.4
3,439,796	+				-0.9
3,439,797	-				+0.1
3,439,797	-				-1.6
3,439,801	-				-0.7
3,439,849	+				+0.2
3,439,849	+				-0.8
3,439,850	-				-0.4
3,439,850	-				+0.5
3,440,115	-		DDA3937_RS14990	0.12	+1.6
3,440,450	+		DDA3937_RS14990	0.32	-0.4
3,440,452	+		DDA3937_RS14990	0.32	-0.6
3,440,452	+		DDA3937_RS14990	0.32	-0.0
3,440,452	+		DDA3937_RS14990	0.32	+0.7
3,440,452	+		DDA3937_RS14990	0.32	-0.6
3,440,452	+		DDA3937_RS14990	0.32	-0.6
3,440,452	+		DDA3937_RS14990	0.32	+0.2
3,440,452	+		DDA3937_RS14990	0.32	-1.6
3,440,453	-		DDA3937_RS14990	0.32	+0.4
3,440,453	-		DDA3937_RS14990	0.32	-0.5
3,440,453	-		DDA3937_RS14990	0.32	-1.7
3,440,453	-		DDA3937_RS14990	0.32	-0.1
3,440,453	-		DDA3937_RS14990	0.32	-1.3
3,440,453	-		DDA3937_RS14990	0.32	+0.1
3,440,453	-				-1.4
3,440,453	-		DDA3937_RS14990	0.32	-2.1
3,440,456	+		DDA3937_RS14990	0.32	+0.6
3,440,456	+		DDA3937_RS14990	0.32	+0.3
3,440,457	-		DDA3937_RS14990	0.33	-1.7
3,440,457	-		DDA3937_RS14990	0.33	+0.2
3,440,527	+		DDA3937_RS14990	0.37	-0.7
3,440,527	+		DDA3937_RS14990	0.37	-0.1
3,440,527	+		DDA3937_RS14990	0.37	+0.3
3,440,528	-		DDA3937_RS14990	0.37	-0.1
3,440,528	-		DDA3937_RS14990	0.37	-1.9
3,440,528	-		DDA3937_RS14990	0.37	-1.3
3,440,528	-		DDA3937_RS14990	0.37	+0.2
3,440,594	+		DDA3937_RS14990	0.41	+0.6
3,440,606	-		DDA3937_RS14990	0.41	+0.4
3,440,709	-		DDA3937_RS14990	0.47	+0.2
3,440,844	+		DDA3937_RS14990	0.55	+0.7
3,440,845	-		DDA3937_RS14990	0.55	-0.4
3,440,945	-		DDA3937_RS14990	0.61	-0.4
3,441,103	+		DDA3937_RS14990	0.70	+0.3
3,441,104	-		DDA3937_RS14990	0.70	-0.7
3,441,104	-		DDA3937_RS14990	0.70	-0.1
3,441,136	+		DDA3937_RS14990	0.72	+0.3
3,441,136	+		DDA3937_RS14990	0.72	+0.9
3,441,136	+		DDA3937_RS14990	0.72	+0.7
3,441,137	-		DDA3937_RS14990	0.72	+0.5
3,441,137	-		DDA3937_RS14990	0.72	-1.1
3,441,137	-				+0.9
3,441,137	-		DDA3937_RS14990	0.72	+1.9
3,441,137	-		DDA3937_RS14990	0.72	+0.4
3,441,169	+		DDA3937_RS14990	0.74	-0.6
3,441,169	+		DDA3937_RS14990	0.74	+1.9
3,441,170	-		DDA3937_RS14990	0.74	+0.2
3,441,170	-		DDA3937_RS14990	0.74	+2.0
3,441,199	+		DDA3937_RS14990	0.76	-0.6
3,441,200	-		DDA3937_RS14990	0.76	-0.4
3,441,200	-		DDA3937_RS14990	0.76	+0.7
3,441,200	-		DDA3937_RS14990	0.76	-0.0
3,441,200	-		DDA3937_RS14990	0.76	+1.2
3,441,431	-		DDA3937_RS14990	0.90	+0.2
3,441,590	+				-0.6
3,441,648	-				-0.2
3,441,648	-				-0.1
3,441,648	-				+0.9
3,441,648	-				-0.4
3,441,648	-				-0.1
3,441,658	+				+1.9
3,441,659	-				+0.9
3,441,873	+				+1.5
3,441,874	-		DDA3937_RS14995	0.16	+0.6
3,441,874	-		DDA3937_RS14995	0.16	+0.1
3,441,905	+		DDA3937_RS14995	0.18	+0.1
3,441,920	-		DDA3937_RS14995	0.19	+0.3
3,441,920	-		DDA3937_RS14995	0.19	+0.0
3,441,920	-		DDA3937_RS14995	0.19	-0.1
3,441,920	-		DDA3937_RS14995	0.19	+0.9
3,442,027	-		DDA3937_RS14995	0.26	-0.6
3,442,234	-		DDA3937_RS14995	0.39	-1.1
3,442,287	+		DDA3937_RS14995	0.43	-1.7
3,442,356	+		DDA3937_RS14995	0.47	+0.6