Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,384,662	+		DDA3937_RS14735	0.30	+0.7
3,384,727	+		DDA3937_RS14735	0.37	+1.0
3,384,727	+		DDA3937_RS14735	0.37	+0.5
3,384,728	-		DDA3937_RS14735	0.37	-1.1
3,384,728	-		DDA3937_RS14735	0.37	-0.1
3,384,728	-		DDA3937_RS14735	0.37	-0.1
3,384,989	+		DDA3937_RS14735	0.61	+0.1
3,384,989	+		DDA3937_RS14735	0.61	+0.6
3,384,989	+		DDA3937_RS14735	0.61	+0.9
3,384,989	+		DDA3937_RS14735	0.61	-1.3
3,384,990	-		DDA3937_RS14735	0.61	-0.5
3,384,990	-		DDA3937_RS14735	0.61	-0.5
3,384,990	-		DDA3937_RS14735	0.61	-0.5
3,385,055	-		DDA3937_RS14735	0.68	-0.4
3,385,135	+		DDA3937_RS14735	0.75	-1.5
3,385,147	-		DDA3937_RS14735	0.76	+0.3
3,385,195	-		DDA3937_RS14735	0.81	-0.1
3,385,271	+		DDA3937_RS14735	0.88	-0.1
3,385,271	+		DDA3937_RS14735	0.88	-0.6
3,385,271	+		DDA3937_RS14735	0.88	-0.2
3,385,271	+		DDA3937_RS14735	0.88	+0.5
3,385,271	+		DDA3937_RS14735	0.88	+1.3
3,385,271	+		DDA3937_RS14735	0.88	-0.4
3,385,271	+		DDA3937_RS14735	0.88	-1.1
3,385,272	-		DDA3937_RS14735	0.88	-0.4
3,385,272	-				+0.9
3,385,272	-		DDA3937_RS14735	0.88	-0.5
3,385,272	-		DDA3937_RS14735	0.88	-1.6
3,385,274	+		DDA3937_RS14735	0.88	+1.6
3,385,274	+		DDA3937_RS14735	0.88	-0.3
3,385,274	+		DDA3937_RS14735	0.88	-1.1
3,385,274	+		DDA3937_RS14735	0.88	-1.1
3,385,274	+		DDA3937_RS14735	0.88	+0.0
3,385,274	+		DDA3937_RS14735	0.88	-1.1
3,385,274	+				+0.3
3,385,275	-		DDA3937_RS14735	0.88	+0.9
3,385,275	-		DDA3937_RS14735	0.88	-0.0
3,385,285	+		DDA3937_RS14735	0.89	-0.4
3,385,286	-		DDA3937_RS14735	0.89	-0.3
3,385,371	+				-0.2
3,385,461	-				+0.6
3,385,461	-				-0.1
3,385,512	+				-0.4
3,385,512	+				+1.0
3,385,513	-				+0.2
3,385,516	-				-0.5
3,385,528	-				-0.2
3,385,534	-				-0.9
3,385,535	+				+0.3
3,385,535	+				-0.7
3,385,535	+				-1.1
3,385,535	+				+0.2
3,385,535	+				-1.0
3,385,535	+				+0.5
3,385,535	+				+0.1
3,385,535	+				-0.6
3,385,535	+				-0.6
3,385,535	+				+1.5
3,385,535	+				-0.1
3,385,535	+				+0.9
3,385,535	+				-1.1
3,385,535	+				-0.7
3,385,535	+				-2.1
3,385,535	+				-1.0
3,385,535	+				+0.1
3,385,535	+				-0.7
3,385,535	+				+0.4
3,385,535	+				-0.1
3,385,535	+				+1.9
3,385,535	+				-0.1
3,385,535	+				+0.5
3,385,535	+				+0.3
3,385,535	+				-0.7
3,385,535	+				-1.0
3,385,535	+				-0.5
3,385,535	+				-0.7
3,385,536	-				+0.1
3,385,536	-				-0.3
3,385,536	-				+1.9
3,385,536	-				-2.0
3,385,536	-				-0.7
3,385,536	-				-0.1
3,385,536	-				-0.1
3,385,536	-				+0.6
3,385,536	-				-0.3
3,385,536	-				-0.1
3,385,536	-				-0.3
3,385,536	-				+3.2
3,385,536	-				+1.6
3,385,536	-				+0.4
3,385,536	-				-0.2
3,385,536	-				+0.9
3,385,536	-				-0.8
3,385,536	-				-0.5
3,385,536	-				+0.3
3,385,592	-				-0.0
3,385,592	-				+0.1
3,385,592	-				+0.6
3,385,593	+				+1.3
3,385,593	+				-0.3
3,385,594	-				+0.1
3,385,594	-				+1.3
3,385,615	+				-0.9
3,385,615	+				+0.1
3,385,616	-				-0.3
3,385,616	-				-0.6
3,385,693	-				+0.5
3,385,702	+				+2.0
3,385,703	-		DDA3937_RS14740	0.11	-0.3
3,385,703	-		DDA3937_RS14740	0.11	+0.2
3,385,703	-		DDA3937_RS14740	0.11	+0.7
3,385,724	-		DDA3937_RS14740	0.15	+0.9
3,385,779	+		DDA3937_RS14740	0.24	+0.0
3,385,862	-		DDA3937_RS14740	0.39	-2.0
3,385,862	-		DDA3937_RS14740	0.39	-1.1
3,386,056	-		DDA3937_RS14740	0.73	+1.7
3,386,074	+		DDA3937_RS14740	0.76	+1.3
3,386,195	+				-0.1
3,386,195	+				-1.1
3,386,195	+				-1.5
3,386,270	+				-1.4
3,386,298	-				-1.1
3,386,313	+				-1.1
3,386,314	-				+1.9
3,386,328	-				-0.1
3,386,334	+				+0.1
3,386,334	+				-0.3
3,386,334	+				-0.7
3,386,335	-				-0.5
3,386,360	+				+0.9
3,386,360	+				-0.5
3,386,360	+				-0.8
3,386,360	+				-0.4
3,386,361	-				-0.9
3,386,361	-				-0.4
3,386,373	+				+0.3
3,386,374	-				-0.6
3,386,377	+				-1.5
3,386,377	+				+1.0
3,386,378	-				-0.8
3,386,378	-				+0.0
3,386,378	-				-0.4
3,386,378	-				+0.0
3,386,440	+				-1.8
3,386,440	+				-2.1
3,386,441	-				-0.1
3,386,441	-				-0.3
3,386,532	+		DDA3937_RS14745	0.10	+0.6
3,386,545	+		DDA3937_RS14745	0.13	-0.1
3,386,546	-		DDA3937_RS14745	0.13	-0.7
3,386,546	-		DDA3937_RS14745	0.13	-0.5
3,386,750	+		DDA3937_RS14745	0.53	-1.3
3,386,751	-		DDA3937_RS14745	0.53	+0.7
3,386,974	+				-2.5
3,387,049	+				+1.5
3,387,050	-				+1.1
3,387,050	-				-0.6
3,387,055	+				+0.8
3,387,056	-				-0.6