Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13335

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,045,582	-		DDA3937_RS13330	0.80	-1.1
3,045,627	+		DDA3937_RS13330	0.81	-0.1
3,045,683	+		DDA3937_RS13330	0.83	-0.5
3,045,684	-		DDA3937_RS13330	0.83	-1.7
3,045,754	-		DDA3937_RS13330	0.85	-0.0
3,045,791	+		DDA3937_RS13330	0.86	-0.3
3,045,791	+		DDA3937_RS13330	0.86	-0.1
3,045,791	+		DDA3937_RS13330	0.86	-0.4
3,045,792	-		DDA3937_RS13330	0.86	-1.2
3,045,800	+		DDA3937_RS13330	0.86	-1.9
3,045,800	+		DDA3937_RS13330	0.86	-1.2
3,045,801	-		DDA3937_RS13330	0.86	+1.4
3,045,801	-		DDA3937_RS13330	0.86	-1.2
3,045,801	-		DDA3937_RS13330	0.86	-0.8
3,045,801	-		DDA3937_RS13330	0.86	-1.0
3,045,801	-		DDA3937_RS13330	0.86	-0.6
3,045,801	-		DDA3937_RS13330	0.86	-0.7
3,045,801	-		DDA3937_RS13330	0.86	-0.5
3,045,806	+		DDA3937_RS13330	0.86	+0.3
3,045,840	+		DDA3937_RS13330	0.87	-0.4
3,045,909	-		DDA3937_RS13330	0.89	-2.6
3,045,909	-		DDA3937_RS13330	0.89	+0.7
3,045,909	-		DDA3937_RS13330	0.89	-1.5
3,045,961	+				-1.1
3,046,224	+				-0.2
3,046,301	+				+0.3
3,046,301	+				-1.2
3,046,302	-				+0.1
3,046,302	-				-0.4
3,046,317	-				+0.5
3,046,328	+				-0.1
3,046,328	+				-0.8
3,046,328	+				-1.0
3,046,328	+				-1.2
3,046,329	-				+0.8
3,046,329	-				+0.1
3,046,329	-				-0.5
3,046,329	-				+0.7
3,046,329	-				+0.5
3,046,331	+				-1.8
3,046,331	+				-0.7
3,046,331	+				-0.9
3,046,331	+				+1.2
3,046,331	+				-1.0
3,046,331	+				-1.4
3,046,332	-				-0.2
3,046,333	+				-0.9
3,046,335	+				-1.2
3,046,335	+				+0.2
3,046,336	-				-0.4
3,046,336	-				+1.6
3,046,374	-				-1.4
3,046,375	+				+0.1
3,046,375	+				+0.0
3,046,376	-				+0.2
3,046,376	-				+0.4
3,046,425	+				+0.7
3,046,426	-				+1.1
3,046,450	-				+0.1
3,046,450	-				-0.9
3,046,450	-				-0.9
3,046,681	-		DDA3937_RS13335	0.27	-0.3
3,046,681	-		DDA3937_RS13335	0.27	-1.3
3,046,747	+		DDA3937_RS13335	0.41	-1.5
3,047,152	+				-0.2
3,047,224	+				-0.5
3,047,224	+				-0.2
3,047,224	+				-0.6
3,047,225	-				-0.5
3,047,275	-				-0.7
3,047,275	-				-1.0
3,047,282	+				+0.2
3,047,282	+				-0.8
3,047,322	+		DDA3937_RS13340	0.12	-2.4
3,047,322	+		DDA3937_RS13340	0.12	-2.0
3,047,323	-		DDA3937_RS13340	0.12	-0.8
3,047,358	-		DDA3937_RS13340	0.16	-1.3
3,047,358	-		DDA3937_RS13340	0.16	-0.4
3,047,405	+		DDA3937_RS13340	0.22	-1.4
3,047,406	-		DDA3937_RS13340	0.22	-1.1
3,047,406	-		DDA3937_RS13340	0.22	-0.6
3,047,495	+		DDA3937_RS13340	0.32	-1.8
3,047,510	+		DDA3937_RS13340	0.34	-1.2
3,047,528	+		DDA3937_RS13340	0.36	-1.0
3,047,556	-		DDA3937_RS13340	0.39	+1.4
3,047,556	-		DDA3937_RS13340	0.39	-0.1
3,047,577	-		DDA3937_RS13340	0.42	+0.0
3,047,741	+		DDA3937_RS13340	0.61	+0.1
3,047,753	+		DDA3937_RS13340	0.63	-2.4
3,047,760	-		DDA3937_RS13340	0.63	-1.5
3,047,778	+		DDA3937_RS13340	0.66	-3.1
3,047,828	+		DDA3937_RS13340	0.72	-2.6
3,047,873	+		DDA3937_RS13340	0.77	-1.4
3,047,874	-		DDA3937_RS13340	0.77	+1.0
3,047,984	+				-1.8
3,047,984	+				+0.2