Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13220

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,013,991	-		DDA3937_RS13215	0.62	+0.4
3,014,054	-		DDA3937_RS13215	0.65	+0.2
3,014,086	+		DDA3937_RS13215	0.66	-1.3
3,014,248	-		DDA3937_RS13215	0.72	+0.2
3,014,458	+		DDA3937_RS13215	0.81	-1.8
3,014,458	+		DDA3937_RS13215	0.81	-0.6
3,014,459	-		DDA3937_RS13215	0.81	-1.8
3,014,461	-		DDA3937_RS13215	0.81	-1.8
3,014,788	+				+0.7
3,014,923	-				+0.8
3,014,944	+				-0.5
3,015,051	-				-2.0
3,015,088	+				+0.1
3,015,278	-		DDA3937_RS13220	0.21	-0.9
3,015,335	+		DDA3937_RS13220	0.25	-0.9
3,015,335	+		DDA3937_RS13220	0.25	+0.6
3,015,578	+		DDA3937_RS13220	0.40	-1.7
3,015,579	-		DDA3937_RS13220	0.41	-0.7
3,016,013	-		DDA3937_RS13220	0.68	-3.0
3,016,157	-		DDA3937_RS13220	0.77	-1.9
3,016,217	-		DDA3937_RS13220	0.81	-0.4
3,016,523	+				-0.8
3,016,524	-				-1.5
3,016,524	-				-0.8
3,016,524	-				+0.8
3,016,534	-				-1.0
3,016,552	-				-0.6
3,016,555	-				+1.8
3,016,555	-				+1.6
3,016,555	-				-0.8
3,016,555	-				-0.5
3,016,567	-				-0.6
3,016,567	-				+0.3
3,016,567	-				-0.5
3,016,603	+				+2.0
3,016,604	-				+0.2
3,016,606	+				+0.5
3,016,606	+				-1.4
3,016,606	+				-0.1
3,016,607	-				+0.1
3,016,607	-				+0.1
3,016,607	-				+0.0
3,016,607	-				-1.8
3,016,607	-				-1.8
3,016,637	+				+0.3
3,016,637	+				+0.2
3,016,637	+				-0.8
3,016,638	-				+0.5
3,016,650	+				-0.1
3,016,700	+				+0.4
3,016,710	+				-0.0
3,016,710	+				+0.1
3,016,716	+				+1.0
3,016,763	-				-0.2
3,016,804	+				-0.8
3,016,804	+				-0.2
3,016,805	-				-0.2
3,016,894	+				+0.4
3,016,894	+				-0.8
3,016,895	-				-0.7
3,016,922	+				-0.4
3,016,922	+				-0.8
3,016,922	+				+0.6
3,016,923	-				+0.8
3,016,923	-				+0.2
3,016,923	-				-0.6
3,016,923	-				-0.3
3,016,977	+		DDA3937_RS22310	0.11	-0.5
3,016,978	-		DDA3937_RS22310	0.11	+1.0
3,017,128	+		DDA3937_RS22310	0.45	-0.2
3,017,128	+		DDA3937_RS22310	0.45	+0.3
3,017,129	-		DDA3937_RS22310	0.45	-1.4
3,017,146	+		DDA3937_RS22310	0.49	+2.1
3,017,147	-				+0.2
3,017,147	-		DDA3937_RS22310	0.49	-0.3
3,017,215	-		DDA3937_RS22310	0.65	+0.8
3,017,307	+		DDA3937_RS22310	0.85	-0.8
3,017,369	+				-1.2
3,017,419	-				+2.1
3,017,422	+				-0.4
3,017,422	+				+1.1
3,017,423	-				-0.8
3,017,423	-				-0.5
3,017,423	-				-0.5
3,017,423	-				+0.1
3,017,447	-				-0.5
3,017,456	+				+0.9
3,017,457	-				-0.5
3,017,491	+				-1.7
3,017,491	+				-0.8
3,017,491	+				+0.8
3,017,491	+				-0.1
3,017,492	-				-0.1
3,017,492	-				-0.2