Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13150

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,997,085	-				-1.5
2,997,118	-				-1.2
2,997,152	-				-1.7
2,997,202	+				-0.3
2,997,286	-		DDA3937_RS13140	0.50	+0.8
2,997,286	-		DDA3937_RS13140	0.50	-2.8
2,997,379	-				-0.3
2,997,379	-				-1.5
2,997,401	-				-1.8
2,997,410	-				+0.4
2,997,413	-				-2.0
2,997,529	-				+0.2
2,997,594	-		DDA3937_RS13145	0.39	+0.1
2,997,845	+		DDA3937_RS13145	0.88	+0.6
2,997,846	-		DDA3937_RS13145	0.88	+0.5
2,997,846	-		DDA3937_RS13145	0.88	-1.1
2,997,846	-		DDA3937_RS13145	0.88	+1.4
2,997,846	-		DDA3937_RS13145	0.88	-1.7
2,997,846	-		DDA3937_RS13145	0.88	-0.8
2,997,898	+				-1.2
2,997,921	-				-2.0
2,998,028	+				+0.4
2,998,046	+				+0.2
2,998,047	-				-0.6
2,998,051	+				-0.6
2,998,051	+				+0.9
2,998,051	+				+0.5
2,998,052	-				+0.0
2,998,052	-				-1.0
2,998,069	+				+1.7
2,998,069	+				-0.2
2,998,069	+				+0.5
2,998,069	+				-0.1
2,998,070	-				+0.2
2,998,070	-				-0.4
2,998,070	-				-0.2
2,998,070	-				-1.4
2,998,070	-				+0.8
2,998,147	+		DDA3937_RS13150	0.13	+0.5
2,998,148	-		DDA3937_RS13150	0.13	-0.1
2,998,261	+		DDA3937_RS13150	0.33	-0.5
2,998,262	-		DDA3937_RS13150	0.33	+0.8
2,998,262	-		DDA3937_RS13150	0.33	-1.2
2,998,264	+		DDA3937_RS13150	0.33	+0.2
2,998,301	-		DDA3937_RS13150	0.39	+0.1
2,998,335	+		DDA3937_RS13150	0.45	+0.5
2,998,336	-		DDA3937_RS13150	0.45	+1.1
2,998,344	+		DDA3937_RS13150	0.47	+0.4
2,998,345	-		DDA3937_RS13150	0.47	+0.1
2,998,345	-		DDA3937_RS13150	0.47	-0.2
2,998,345	-		DDA3937_RS13150	0.47	+0.3
2,998,345	-		DDA3937_RS13150	0.47	+1.0
2,998,428	+		DDA3937_RS13150	0.61	+0.9
2,998,428	+		DDA3937_RS13150	0.61	+0.4
2,998,443	+		DDA3937_RS13150	0.64	+0.4
2,998,443	+		DDA3937_RS13150	0.64	+0.4
2,998,444	-		DDA3937_RS13150	0.64	+0.6
2,998,444	-		DDA3937_RS13150	0.64	-0.5
2,998,445	+		DDA3937_RS13150	0.64	+0.1
2,998,481	+		DDA3937_RS13150	0.70	-0.4
2,998,482	-		DDA3937_RS13150	0.70	+0.4
2,998,482	-		DDA3937_RS13150	0.70	+0.1
2,998,482	-		DDA3937_RS13150	0.70	-0.6
2,998,482	-		DDA3937_RS13150	0.70	-0.7
2,998,482	-		DDA3937_RS13150	0.70	+0.4
2,998,522	+		DDA3937_RS13150	0.77	-1.5
2,998,522	+		DDA3937_RS13150	0.77	-0.2
2,998,579	+		DDA3937_RS13150	0.87	+0.1
2,998,579	+		DDA3937_RS13150	0.87	+0.6
2,998,580	-		DDA3937_RS13150	0.87	-1.2
2,998,580	-		DDA3937_RS13150	0.87	+0.4
2,998,594	-		DDA3937_RS13150	0.90	+0.1
2,998,603	+				+0.3
2,998,604	-				+1.3
2,998,604	-				+0.3
2,998,645	-				-0.1
2,998,647	+				+0.8
2,998,647	+				-1.0
2,998,647	+				-0.0
2,998,647	+				+0.2
2,998,647	+				+0.6
2,998,648	-				-0.7
2,998,648	-				-0.5
2,998,715	-				+0.3
2,998,786	+				-1.5
2,998,787	-				-0.9
2,998,787	-				-0.8
2,998,930	-		DDA3937_RS13155	0.22	-0.3
2,999,013	-		DDA3937_RS13155	0.31	-0.5
2,999,047	+		DDA3937_RS13155	0.34	+0.1
2,999,047	+		DDA3937_RS13155	0.34	-0.2
2,999,048	-		DDA3937_RS13155	0.34	-0.8
2,999,048	-		DDA3937_RS13155	0.34	-2.0
2,999,114	-		DDA3937_RS13155	0.41	-1.2
2,999,152	-		DDA3937_RS13155	0.45	-0.9
2,999,322	-		DDA3937_RS13155	0.63	-1.2
2,999,360	-				+1.2
2,999,360	-		DDA3937_RS13155	0.67	+0.8
2,999,376	+		DDA3937_RS13155	0.68	-0.3
2,999,376	+		DDA3937_RS13155	0.68	-0.1
2,999,376	+		DDA3937_RS13155	0.68	-1.0
2,999,376	+		DDA3937_RS13155	0.68	-0.5
2,999,376	+		DDA3937_RS13155	0.68	-0.2
2,999,377	-		DDA3937_RS13155	0.69	+0.8
2,999,377	-		DDA3937_RS13155	0.69	-1.3
2,999,389	-		DDA3937_RS13155	0.70	-0.3
2,999,476	+		DDA3937_RS13155	0.79	-0.4
2,999,477	-		DDA3937_RS13155	0.79	+2.0
2,999,528	-		DDA3937_RS13155	0.84	-0.2
2,999,531	+		DDA3937_RS13155	0.85	-0.5