Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,933,458	-		DDA3937_RS12870	0.34	+0.3
2,933,477	+		DDA3937_RS12870	0.35	-0.1
2,933,520	+		DDA3937_RS12870	0.39	-0.2
2,933,534	+		DDA3937_RS12870	0.40	-0.8
2,933,534	+		DDA3937_RS12870	0.40	-2.5
2,933,534	+		DDA3937_RS12870	0.40	+0.6
2,933,535	-				+1.4
2,933,535	-		DDA3937_RS12870	0.40	+0.1
2,933,535	-		DDA3937_RS12870	0.40	-0.3
2,933,535	-		DDA3937_RS12870	0.40	-0.1
2,933,535	-		DDA3937_RS12870	0.40	+1.1
2,933,535	-		DDA3937_RS12870	0.40	+0.3
2,933,563	-		DDA3937_RS12870	0.43	+0.2
2,933,595	+		DDA3937_RS12870	0.45	-0.5
2,933,644	+				-0.8
2,933,653	-		DDA3937_RS12870	0.50	-1.5
2,933,653	-		DDA3937_RS12870	0.50	+1.1
2,933,737	+		DDA3937_RS12870	0.58	-0.2
2,933,738	-		DDA3937_RS12870	0.58	-0.5
2,933,738	-		DDA3937_RS12870	0.58	+0.3
2,934,018	-		DDA3937_RS12870	0.82	-0.3
2,934,028	-		DDA3937_RS12870	0.83	+1.1
2,934,047	+		DDA3937_RS12870	0.85	-0.5
2,934,048	-		DDA3937_RS12870	0.85	-2.4
2,934,087	+		DDA3937_RS12870	0.88	-2.8
2,934,088	-		DDA3937_RS12870	0.88	-0.2
2,934,299	+				-0.2
2,934,299	+				-0.4
2,934,300	-				-0.4
2,934,300	-				-1.1
2,934,300	-				+0.3
2,934,300	-				+0.0
2,934,421	-		DDA3937_RS12875	0.24	+0.3
2,934,426	+		DDA3937_RS12875	0.24	-0.4
2,934,427	-				-0.2
2,934,427	-		DDA3937_RS12875	0.25	+0.2
2,934,427	-		DDA3937_RS12875	0.25	+1.1
2,934,487	-		DDA3937_RS12875	0.32	-0.2
2,934,487	-				-0.2
2,934,579	-		DDA3937_RS12875	0.44	-0.9
2,934,579	-		DDA3937_RS12875	0.44	+0.1
2,934,649	+		DDA3937_RS12875	0.53	+0.6
2,934,649	+		DDA3937_RS12875	0.53	-1.5
2,934,650	-		DDA3937_RS12875	0.53	+0.5
2,934,650	-		DDA3937_RS12875	0.53	+1.6
2,934,661	+		DDA3937_RS12875	0.54	-0.5
2,934,662	-		DDA3937_RS12875	0.54	+0.6
2,934,662	-		DDA3937_RS12875	0.54	+0.9
2,934,662	-		DDA3937_RS12875	0.54	+1.1
2,934,662	-		DDA3937_RS12875	0.54	+0.1
2,934,713	-		DDA3937_RS12875	0.61	+0.0
2,934,713	-		DDA3937_RS12875	0.61	+0.0
2,934,844	-		DDA3937_RS12875	0.77	-0.4
2,934,860	-		DDA3937_RS12875	0.79	+0.0
2,934,922	+		DDA3937_RS12875	0.87	+0.3
2,934,923	-		DDA3937_RS12875	0.87	+0.8
2,935,004	+				+0.2
2,935,004	+				+0.0
2,935,005	-				-0.5
2,935,005	-				-0.1
2,935,028	+				+0.4
2,935,029	-				-0.0
2,935,106	+		DDA3937_RS12880	0.11	+0.1
2,935,106	+		DDA3937_RS12880	0.11	-0.3
2,935,106	+				+1.5
2,935,107	-		DDA3937_RS12880	0.11	+2.4
2,935,107	-		DDA3937_RS12880	0.11	-0.2
2,935,109	+		DDA3937_RS12880	0.11	+0.4
2,935,109	+		DDA3937_RS12880	0.11	+0.1
2,935,109	+		DDA3937_RS12880	0.11	-0.4
2,935,109	+		DDA3937_RS12880	0.11	+0.6
2,935,110	-		DDA3937_RS12880	0.11	+0.2
2,935,306	+		DDA3937_RS12880	0.36	+1.2
2,935,309	+		DDA3937_RS12880	0.36	-0.4
2,935,310	-		DDA3937_RS12880	0.37	-0.4
2,935,495	+		DDA3937_RS12880	0.60	-0.5
2,935,496	-		DDA3937_RS12880	0.60	+0.5
2,935,833	-				+0.4
2,935,834	+				-1.1
2,935,835	-				-0.7
2,935,877	-				-0.1
2,935,881	+				-0.5
2,935,881	+				+1.0
2,935,881	+				+0.7
2,935,887	+				-0.1