Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12610

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,868,548	+				-1.1
2,868,548	+				-1.6
2,868,549	-				+0.1
2,868,549	-				-2.1
2,868,621	+				-0.7
2,868,655	-				-0.3
2,868,655	-				-1.4
2,868,671	+				-0.7
2,868,682	+				-0.3
2,868,682	+				+0.6
2,869,004	-		DDA3937_RS12605	0.46	-2.4
2,869,367	+				+0.3
2,869,367	+				-1.6
2,869,368	-				-0.4
2,869,422	+				-0.5
2,869,422	+				-0.5
2,869,422	+				-0.3
2,869,422	+				-0.3
2,869,423	-				-0.8
2,869,435	+				+1.4
2,869,468	-				-1.1
2,869,480	+				-2.4
2,869,481	-				-0.8
2,869,481	-				+0.7
2,869,507	+				+0.7
2,869,508	-				-0.4
2,869,555	+		DDA3937_RS12610	0.22	-0.2
2,869,556	-		DDA3937_RS12610	0.22	+0.7
2,869,556	-		DDA3937_RS12610	0.22	-1.1
2,869,556	-		DDA3937_RS12610	0.22	-0.7
2,869,556	-		DDA3937_RS12610	0.22	-0.7
2,869,556	-		DDA3937_RS12610	0.22	-2.2
2,869,633	+		DDA3937_RS12610	0.44	+0.5
2,869,681	+		DDA3937_RS12610	0.58	-2.2
2,869,716	+		DDA3937_RS12610	0.68	-0.3
2,869,880	-				-0.4
2,869,894	-				-0.2
2,869,922	+				+0.3
2,869,922	+				-1.6
2,869,923	-				-1.4
2,869,927	+				-0.0
2,869,927	+				-0.4
2,869,966	-				+0.3
2,869,973	+				+0.4
2,870,024	+				-0.7
2,870,025	-				-1.9
2,870,025	-				+0.1
2,870,025	-				-0.4
2,870,059	-				-0.0
2,870,059	-				+1.2
2,870,068	+				-0.4
2,870,069	-				+0.3
2,870,069	-				-0.1
2,870,069	-				+0.5
2,870,080	-				-1.3
2,870,120	-				+1.4
2,870,157	+				-0.1
2,870,168	+				+0.3
2,870,168	+				+0.2
2,870,176	-				-0.9
2,870,187	-				-0.5
2,870,236	-				+0.1
2,870,236	-				-0.9
2,870,236	-				-0.6
2,870,236	-				-1.6
2,870,280	+		DDA3937_RS12615	0.12	-1.7
2,870,334	+		DDA3937_RS12615	0.18	+0.5
2,870,334	+		DDA3937_RS12615	0.18	-0.3
2,870,335	-		DDA3937_RS12615	0.18	-0.7
2,870,426	-		DDA3937_RS12615	0.27	+0.3
2,870,426	-		DDA3937_RS12615	0.27	+0.2
2,870,433	+		DDA3937_RS12615	0.28	-1.1
2,870,433	+		DDA3937_RS12615	0.28	+0.9
2,870,509	-		DDA3937_RS12615	0.35	+0.7
2,870,509	-		DDA3937_RS12615	0.35	+0.5
2,870,568	+		DDA3937_RS12615	0.41	-0.0
2,870,568	+		DDA3937_RS12615	0.41	-0.6
2,870,569	-		DDA3937_RS12615	0.41	+0.0
2,870,569	-		DDA3937_RS12615	0.41	-0.4
2,870,569	-		DDA3937_RS12615	0.41	+0.3
2,870,605	-		DDA3937_RS12615	0.45	-0.4
2,870,605	-		DDA3937_RS12615	0.45	-0.2
2,870,700	+		DDA3937_RS12615	0.55	+0.7
2,870,797	+		DDA3937_RS12615	0.64	-0.3
2,870,798	-		DDA3937_RS12615	0.65	-1.3
2,870,821	+		DDA3937_RS12615	0.67	-1.9
2,870,822	-		DDA3937_RS12615	0.67	-0.3
2,870,822	-		DDA3937_RS12615	0.67	+0.5