Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,827,988	-				-0.3
2,827,988	-				+0.1
2,827,990	+				-0.6
2,828,131	+		DDA3937_RS12425	0.14	-0.5
2,828,131	+		DDA3937_RS12425	0.14	-0.3
2,828,131	+		DDA3937_RS12425	0.14	-0.9
2,828,659	+				-0.3
2,828,706	+				-1.3
2,828,747	+				+0.3
2,828,747	+				-1.1
2,828,748	-				+2.0
2,828,748	-				-0.3
2,828,781	+				+1.2
2,828,886	+				+1.7
2,828,886	+				+0.1
2,828,891	-				-0.3
2,828,908	-				-0.4
2,828,914	+				-0.4
2,828,914	+				+0.2
2,828,914	+				-0.4
2,829,071	+		DDA3937_RS12430	0.15	-1.3
2,829,071	+		DDA3937_RS12430	0.15	-0.2
2,829,071	+		DDA3937_RS12430	0.15	-0.3
2,829,072	-		DDA3937_RS12430	0.15	-1.1
2,829,296	+		DDA3937_RS12430	0.38	-1.2
2,829,334	-		DDA3937_RS12430	0.41	+0.1
2,829,579	-		DDA3937_RS12430	0.66	-1.2
2,829,852	+				-1.0
2,829,863	+				-0.0
2,829,863	+				-0.1
2,829,863	+				+2.0
2,829,863	+				-0.5
2,829,863	+				+0.9
2,829,864	-				-0.2
2,829,864	-				+1.4
2,829,864	-				-0.3
2,829,988	+				-0.6
2,829,989	-				+0.5
2,830,102	+				-0.6
2,830,102	+				-0.6
2,830,102	+				-0.7
2,830,120	+				-0.6
2,830,158	+				-1.0
2,830,159	-				-2.1
2,830,159	-				-0.2
2,830,224	+		DDA3937_RS12435	0.12	+0.1
2,830,248	+		DDA3937_RS12435	0.14	-0.0
2,830,249	-		DDA3937_RS12435	0.14	+0.7
2,830,249	-		DDA3937_RS12435	0.14	+1.9
2,830,249	-		DDA3937_RS12435	0.14	+0.1
2,830,249	-		DDA3937_RS12435	0.14	-0.3
2,830,249	-		DDA3937_RS12435	0.14	+0.0
2,830,249	-		DDA3937_RS12435	0.14	+0.8
2,830,416	+		DDA3937_RS12435	0.28	+0.5
2,830,417	-		DDA3937_RS12435	0.28	-2.1
2,830,530	+		DDA3937_RS12435	0.38	-0.7
2,830,531	-		DDA3937_RS12435	0.38	+0.0
2,830,819	+		DDA3937_RS12435	0.62	-0.5
2,830,820	-				+1.7
2,830,838	+				+1.1