Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12265

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,785,610	-		DDA3937_RS12260	0.30	-0.9
2,785,644	+		DDA3937_RS12260	0.32	+1.0
2,785,644	+				-1.3
2,785,644	+		DDA3937_RS12260	0.32	+0.7
2,785,644	+		DDA3937_RS12260	0.32	+0.7
2,785,644	+		DDA3937_RS12260	0.32	+1.3
2,785,645	-		DDA3937_RS12260	0.32	-0.6
2,785,645	-		DDA3937_RS12260	0.32	-0.9
2,785,645	-		DDA3937_RS12260	0.32	-0.4
2,785,645	-		DDA3937_RS12260	0.32	+0.7
2,785,645	-		DDA3937_RS12260	0.32	-0.3
2,785,691	+		DDA3937_RS12260	0.35	-0.5
2,785,806	+		DDA3937_RS12260	0.43	-0.1
2,785,807	-		DDA3937_RS12260	0.43	+0.1
2,785,866	+		DDA3937_RS12260	0.48	-0.3
2,785,866	+		DDA3937_RS12260	0.48	-0.6
2,785,866	+		DDA3937_RS12260	0.48	+0.2
2,785,866	+		DDA3937_RS12260	0.48	-1.2
2,785,867	-		DDA3937_RS12260	0.48	-3.2
2,785,867	-		DDA3937_RS12260	0.48	-0.7
2,785,867	-		DDA3937_RS12260	0.48	-0.4
2,785,872	+		DDA3937_RS12260	0.48	+0.1
2,785,872	+		DDA3937_RS12260	0.48	-0.9
2,785,894	-		DDA3937_RS12260	0.50	-0.7
2,785,894	-		DDA3937_RS12260	0.50	-0.3
2,785,996	+		DDA3937_RS12260	0.57	-0.9
2,785,997	-		DDA3937_RS12260	0.57	+0.4
2,786,001	+		DDA3937_RS12260	0.57	-0.3
2,786,001	+		DDA3937_RS12260	0.57	+0.1
2,786,001	+		DDA3937_RS12260	0.57	-0.7
2,786,002	-				+2.3
2,786,002	-		DDA3937_RS12260	0.57	+0.9
2,786,036	+		DDA3937_RS12260	0.60	+0.7
2,786,036	+		DDA3937_RS12260	0.60	-0.6
2,786,036	+		DDA3937_RS12260	0.60	-1.3
2,786,036	+		DDA3937_RS12260	0.60	+1.1
2,786,036	+		DDA3937_RS12260	0.60	-1.0
2,786,036	+		DDA3937_RS12260	0.60	-0.9
2,786,036	+		DDA3937_RS12260	0.60	+0.1
2,786,036	+		DDA3937_RS12260	0.60	+0.7
2,786,036	+		DDA3937_RS12260	0.60	-0.6
2,786,036	+		DDA3937_RS12260	0.60	-0.1
2,786,037	-		DDA3937_RS12260	0.60	-0.3
2,786,037	-		DDA3937_RS12260	0.60	-0.3
2,786,037	-		DDA3937_RS12260	0.60	+0.3
2,786,037	-		DDA3937_RS12260	0.60	+0.5
2,786,037	-		DDA3937_RS12260	0.60	-0.7
2,786,085	+		DDA3937_RS12260	0.63	+0.4
2,786,090	+		DDA3937_RS12260	0.63	+0.4
2,786,124	+		DDA3937_RS12260	0.66	+1.3
2,786,124	+		DDA3937_RS12260	0.66	-0.7
2,786,125	-		DDA3937_RS12260	0.66	+0.2
2,786,125	-		DDA3937_RS12260	0.66	-0.5
2,786,143	-		DDA3937_RS12260	0.67	-1.6
2,786,148	+		DDA3937_RS12260	0.67	-0.3
2,786,148	+		DDA3937_RS12260	0.67	+0.3
2,786,148	+		DDA3937_RS12260	0.67	-0.0
2,786,193	+		DDA3937_RS12260	0.71	+0.5
2,786,193	+		DDA3937_RS12260	0.71	-0.3
2,786,193	+		DDA3937_RS12260	0.71	+0.1
2,786,193	+		DDA3937_RS12260	0.71	+0.5
2,786,193	+		DDA3937_RS12260	0.71	-1.0
2,786,194	-		DDA3937_RS12260	0.71	-1.7
2,786,194	-		DDA3937_RS12260	0.71	-0.6
2,786,194	-		DDA3937_RS12260	0.71	-0.6
2,786,194	-		DDA3937_RS12260	0.71	-0.8
2,786,194	-		DDA3937_RS12260	0.71	-3.0
2,786,194	-		DDA3937_RS12260	0.71	-1.6
2,786,253	+		DDA3937_RS12260	0.75	+0.1
2,786,253	+		DDA3937_RS12260	0.75	-1.2
2,786,254	-		DDA3937_RS12260	0.75	-0.2
2,786,267	-		DDA3937_RS12260	0.76	+0.7
2,786,398	-		DDA3937_RS12260	0.85	-1.1
2,786,410	+		DDA3937_RS12260	0.86	-0.3
2,786,653	+				-0.8
2,786,654	-				-0.3
2,786,672	+				-0.3
2,786,673	-				+0.3
2,786,706	+		DDA3937_RS12265	0.14	-0.3
2,786,707	-		DDA3937_RS12265	0.14	-0.6
2,786,995	+		DDA3937_RS12265	0.55	+0.2
2,786,996	-		DDA3937_RS12265	0.55	+0.4
2,787,004	+		DDA3937_RS12265	0.57	-2.3
2,787,005	-		DDA3937_RS12265	0.57	-0.6
2,787,015	+		DDA3937_RS12265	0.58	+1.8
2,787,016	-		DDA3937_RS12265	0.58	-1.3
2,787,082	+		DDA3937_RS12265	0.68	-0.6
2,787,120	-		DDA3937_RS12265	0.73	-1.1
2,787,122	+		DDA3937_RS12265	0.74	-1.6
2,787,122	+		DDA3937_RS12265	0.74	-1.3
2,787,123	-		DDA3937_RS12265	0.74	-1.5
2,787,167	-		DDA3937_RS12265	0.80	-2.1
2,787,197	+		DDA3937_RS12265	0.84	-1.3
2,787,282	+				+0.0
2,787,283	-				-0.5
2,787,283	-				+0.0
2,787,283	-				+0.0
2,787,292	+				-0.2
2,787,292	+				-1.4
2,787,292	+				-0.4
2,787,360	+				-1.7
2,787,360	+				-0.2
2,787,360	+				-0.3
2,787,360	+				-1.6
2,787,361	-				-0.3
2,787,361	-				+1.5
2,787,361	-				+0.3
2,787,361	-				-0.1
2,787,361	-				-0.1
2,787,361	-				-0.2
2,787,363	+				-0.3
2,787,363	+				-0.4
2,787,364	-				-0.8
2,787,364	-				+1.2
2,787,391	+				-0.1
2,787,486	-				-0.5
2,787,486	-				-0.6
2,787,675	-				-0.1
2,787,821	-		DDA3937_RS12270	0.11	-2.0
2,787,821	-		DDA3937_RS12270	0.11	+0.9
2,787,829	+		DDA3937_RS12270	0.11	+1.1
2,788,004	+		DDA3937_RS12270	0.15	+0.1
2,788,017	-		DDA3937_RS12270	0.16	-0.2
2,788,038	+		DDA3937_RS12270	0.16	-1.5
2,788,039	-		DDA3937_RS12270	0.16	+0.9
2,788,058	+		DDA3937_RS12270	0.17	-1.3
2,788,058	+		DDA3937_RS12270	0.17	+0.3
2,788,058	+		DDA3937_RS12270	0.17	+0.4
2,788,202	+		DDA3937_RS12270	0.20	-0.1
2,788,224	-		DDA3937_RS12270	0.21	+0.4
2,788,254	+		DDA3937_RS12270	0.22	-1.2
2,788,255	-		DDA3937_RS12270	0.22	-0.4