Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12040

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,738,023	+		DDA3937_RS12030	0.55	-0.7
2,738,023	+		DDA3937_RS12030	0.55	-0.3
2,738,094	-		DDA3937_RS12030	0.86	+0.2
2,738,121	+				-0.9
2,738,141	+				+0.1
2,738,141	+				-0.9
2,738,142	-				-0.6
2,738,142	-				-1.1
2,738,296	-				-0.2
2,738,296	-				-1.1
2,738,416	+				-0.1
2,738,436	-				-2.5
2,738,466	+				-0.4
2,738,503	+				+1.3
2,738,507	-				-1.3
2,738,531	-				+1.6
2,738,534	-				-0.3
2,738,659	-				+0.1
2,738,659	-				-0.0
2,738,682	+				+0.2
2,738,683	-				+0.7
2,738,683	-				+0.3
2,738,706	-				-0.4
2,738,711	+				-0.9
2,738,726	+				+0.1
2,738,769	-		DDA3937_RS12035	0.25	-0.3
2,738,881	+				-0.9
2,738,882	-		DDA3937_RS12035	0.81	-1.7
2,738,882	-		DDA3937_RS12035	0.81	+1.3
2,738,882	-		DDA3937_RS12035	0.81	-0.3
2,738,909	-				-1.2
2,738,992	+				-0.4
2,738,992	+				-1.2
2,738,992	+				-1.6
2,738,992	+				-0.4
2,738,993	-				+0.4
2,738,993	-				-0.6
2,738,993	-				+0.8
2,739,262	+		DDA3937_RS12040	0.58	-1.7
2,739,365	+		DDA3937_RS12040	0.80	-1.0
2,739,366	-				+1.1
2,739,366	-		DDA3937_RS12040	0.80	-0.6
2,739,366	-		DDA3937_RS12040	0.80	+0.7
2,739,398	-		DDA3937_RS12040	0.87	-0.7
2,739,416	+				+0.1
2,739,416	+				+0.7
2,739,416	+				-1.4
2,739,416	+				+0.8
2,739,417	-				-1.7
2,739,417	-				-0.2
2,739,417	-				+0.5
2,739,417	-				-0.1
2,739,417	-				+0.3
2,739,417	-				-0.3
2,739,419	-				+0.4
2,739,468	+				-2.2
2,739,522	-				+0.5
2,739,612	-				-0.9
2,739,668	+				-2.2
2,739,691	+				+0.3
2,739,692	-				+1.5
2,739,697	-				+0.8
2,739,697	-				-0.6
2,739,697	-				-1.2
2,739,706	+				+1.4
2,739,739	+				-0.1
2,739,740	-				-0.8
2,739,813	-				-0.6
2,739,813	-				-1.1
2,739,816	-				-2.7
2,739,965	+		DDA3937_RS12045	0.12	-0.0
2,739,998	+		DDA3937_RS12045	0.17	-0.7
2,740,040	+		DDA3937_RS12045	0.23	-2.5
2,740,041	-		DDA3937_RS12045	0.24	-0.3
2,740,123	-		DDA3937_RS12045	0.36	+0.4
2,740,123	-		DDA3937_RS12045	0.36	-0.3
2,740,154	-		DDA3937_RS12045	0.41	+0.4
2,740,184	+		DDA3937_RS12045	0.45	-1.2
2,740,185	-		DDA3937_RS12045	0.45	+0.7
2,740,188	-		DDA3937_RS12045	0.46	+0.5
2,740,188	-		DDA3937_RS12045	0.46	+1.2
2,740,219	+		DDA3937_RS12045	0.50	-0.6
2,740,220	-		DDA3937_RS12045	0.51	-0.5
2,740,241	-		DDA3937_RS12045	0.54	-0.3
2,740,317	-		DDA3937_RS12045	0.65	+0.5
2,740,357	-		DDA3937_RS12045	0.71	+0.0
2,740,434	-		DDA3937_RS12045	0.83	+0.7