Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,545,026	+		DDA3937_RS11185	0.86	-0.1
2,545,027	-		DDA3937_RS11185	0.86	-1.3
2,545,048	+				-1.4
2,545,341	-				+0.6
2,545,349	-				-1.0
2,545,503	-		DDA3937_RS11190	0.33	-0.1
2,545,511	+		DDA3937_RS11190	0.34	+0.0
2,545,511	+		DDA3937_RS11190	0.34	+0.0
2,545,512	-		DDA3937_RS11190	0.35	+0.1
2,545,512	-		DDA3937_RS11190	0.35	-0.7
2,545,522	-		DDA3937_RS11190	0.37	-0.4
2,545,594	-		DDA3937_RS11190	0.52	+0.2
2,545,611	+		DDA3937_RS11190	0.56	+1.2
2,545,612	-		DDA3937_RS11190	0.56	+0.6
2,545,612	-		DDA3937_RS11190	0.56	+0.9
2,545,612	-		DDA3937_RS11190	0.56	+1.5
2,545,612	-		DDA3937_RS11190	0.56	+0.6
2,545,616	-		DDA3937_RS11190	0.57	-0.3
2,545,616	-				+1.6
2,545,648	+		DDA3937_RS11190	0.64	-0.4
2,545,668	+		DDA3937_RS11190	0.68	-1.1
2,545,668	+		DDA3937_RS11190	0.68	-1.2
2,545,668	+		DDA3937_RS11190	0.68	-2.2
2,545,669	-		DDA3937_RS11190	0.69	+0.6
2,545,669	-		DDA3937_RS11190	0.69	-0.6
2,545,798	+				-0.2
2,545,798	+				-0.3
2,545,798	+				-0.2
2,545,799	-				-1.3
2,545,819	+				+0.1
2,545,819	+				-0.4
2,545,820	-				-0.4
2,545,820	-				-0.7
2,545,820	-				+0.6
2,545,840	+				-0.7
2,545,841	-				+0.1
2,545,845	+				-2.2
2,545,845	+				+0.2
2,545,846	-				+0.0
2,545,909	-				+0.1
2,545,909	-				-1.7
2,545,909	-				-1.2
2,545,942	-				-0.8
2,545,942	-				-0.2
2,546,022	+		DDA3937_RS11195	0.18	+0.5
2,546,040	-		DDA3937_RS11195	0.21	-0.5
2,546,079	+		DDA3937_RS11195	0.27	-0.5
2,546,080	-		DDA3937_RS11195	0.27	-0.3
2,546,080	-		DDA3937_RS11195	0.27	-0.6
2,546,142	+		DDA3937_RS11195	0.36	-1.7
2,546,161	-		DDA3937_RS11195	0.39	-1.6
2,546,377	-		DDA3937_RS11195	0.72	-0.5
2,546,472	+		DDA3937_RS11195	0.87	-0.1
2,546,472	+		DDA3937_RS11195	0.87	+0.6
2,546,472	+		DDA3937_RS11195	0.87	-1.4
2,546,472	+		DDA3937_RS11195	0.87	-0.8
2,546,472	+		DDA3937_RS11195	0.87	-1.4
2,546,473	-		DDA3937_RS11195	0.87	-0.0
2,546,473	-		DDA3937_RS11195	0.87	-1.7
2,546,473	-		DDA3937_RS11195	0.87	-0.6
2,546,473	-		DDA3937_RS11195	0.87	+0.0
2,546,473	-		DDA3937_RS11195	0.87	-0.4
2,546,473	-		DDA3937_RS11195	0.87	-2.2
2,546,483	+		DDA3937_RS11195	0.88	+0.3
2,546,484	-		DDA3937_RS11195	0.88	+0.6
2,546,484	-		DDA3937_RS11195	0.88	+0.4
2,546,484	-		DDA3937_RS11195	0.88	-0.0
2,546,500	+				-2.4
2,546,500	+				-1.2
2,546,501	-				+0.4
2,546,501	-				-1.0
2,546,501	-				+0.4
2,546,503	+				-1.2
2,546,503	+				-2.0
2,546,503	+				+0.5
2,546,503	+				-0.0
2,546,504	-				-0.2
2,546,504	-				-1.4
2,546,509	-				-0.7
2,546,527	+				+0.0
2,546,555	+				-2.0
2,546,555	+				+0.1
2,546,555	+				+0.1
2,546,555	+				-0.7
2,546,555	+				-1.8
2,546,555	+				-2.0
2,546,556	-				-0.5
2,546,556	-				-0.4
2,546,556	-				-0.3
2,546,556	-				+0.0
2,546,556	-				+0.8
2,546,556	-				+0.2
2,546,561	+				-0.1
2,546,561	+				-0.1
2,546,562	-				+0.4
2,546,562	-				-0.5
2,546,562	-				-1.7
2,546,562	-				-0.4
2,546,562	-				-1.4
2,546,562	-				+0.9
2,546,562	-				+0.4
2,546,562	-				-0.5
2,546,725	+				-0.7
2,546,726	-				-2.6
2,546,747	+				+1.2
2,546,772	+				-1.2
2,546,777	-				-0.1
2,546,794	+				-0.4
2,546,795	-				-0.5
2,546,795	-				+0.8
2,546,838	+				-0.7
2,546,855	+				+0.6
2,546,873	-				+0.4
2,546,914	+				-0.7
2,546,914	+				-1.0
2,546,945	+				+1.0
2,547,159	+		DDA3937_RS11200	0.82	+0.6
2,547,159	+		DDA3937_RS11200	0.82	+0.9
2,547,159	+		DDA3937_RS11200	0.82	-0.3
2,547,159	+		DDA3937_RS11200	0.82	-0.2
2,547,160	-		DDA3937_RS11200	0.82	-1.1
2,547,165	+				+0.6
2,547,166	-		DDA3937_RS11200	0.84	-0.1
2,547,166	-		DDA3937_RS11200	0.84	-0.4
2,547,166	-		DDA3937_RS11200	0.84	-0.4
2,547,192	+				-1.1
2,547,204	+				+0.4
2,547,204	+				-0.4
2,547,204	+				-0.9
2,547,205	-				-1.0
2,547,205	-				-1.6
2,547,205	-				-0.5
2,547,205	-				-1.4
2,547,205	-				-0.7
2,547,205	-				+0.2
2,547,261	+				+1.2
2,547,261	+				+0.1
2,547,261	+				-0.8
2,547,261	+				+0.0
2,547,262	-				-0.7
2,547,262	-				-0.2
2,547,262	-				-1.0
2,547,262	-				+0.1
2,547,263	+				-0.1
2,547,264	-				-2.0
2,547,264	-				-1.0
2,547,264	-				+0.0
2,547,287	+				+1.6
2,547,287	+				+0.6
2,547,297	+				+2.9
2,547,318	-				-0.4
2,547,318	-				-3.1
2,547,362	-				-0.2
2,547,362	-				-0.3
2,547,425	+		DDA3937_RS11205	0.11	-0.7
2,547,426	-		DDA3937_RS11205	0.11	-1.3
2,547,531	-		DDA3937_RS11205	0.26	+0.0
2,547,548	+		DDA3937_RS11205	0.28	+0.0