Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,495,728	-				-0.3
2,495,738	-				+0.0
2,495,805	+				-0.3
2,495,874	-				+0.3
2,495,902	+				-0.8
2,495,903	-				+0.1
2,495,941	+		DDA3937_RS11065	0.12	+0.8
2,495,942	-		DDA3937_RS11065	0.12	+0.8
2,496,025	+		DDA3937_RS11065	0.27	+2.6
2,496,025	+		DDA3937_RS11065	0.27	+1.2
2,496,026	-				+0.9
2,496,026	-		DDA3937_RS11065	0.27	+1.0
2,496,027	+		DDA3937_RS11065	0.27	-0.4
2,496,028	-		DDA3937_RS11065	0.27	-0.1
2,496,127	+		DDA3937_RS11065	0.44	+0.3
2,496,127	+		DDA3937_RS11065	0.44	-2.0
2,496,127	+		DDA3937_RS11065	0.44	+0.7
2,496,128	-		DDA3937_RS11065	0.45	-0.0
2,496,128	-		DDA3937_RS11065	0.45	-1.4
2,496,193	-		DDA3937_RS11065	0.56	-2.0
2,496,193	-		DDA3937_RS11065	0.56	+0.0
2,496,193	-		DDA3937_RS11065	0.56	-0.2
2,496,193	-		DDA3937_RS11065	0.56	-0.2
2,496,223	+		DDA3937_RS11065	0.61	-0.9
2,496,224	-		DDA3937_RS11065	0.61	+0.6
2,496,358	+		DDA3937_RS11065	0.84	+0.9
2,496,358	+		DDA3937_RS11065	0.84	-0.7
2,496,359	-		DDA3937_RS11065	0.84	+0.5
2,496,370	+		DDA3937_RS11065	0.86	-0.4
2,496,371	-		DDA3937_RS11065	0.87	+0.6
2,496,371	-		DDA3937_RS11065	0.87	+0.6
2,496,371	-		DDA3937_RS11065	0.87	-2.0
2,496,371	-		DDA3937_RS11065	0.87	-2.0
2,496,376	-		DDA3937_RS11065	0.87	+0.4
2,496,376	-		DDA3937_RS11065	0.87	+1.0
2,496,376	-		DDA3937_RS11065	0.87	-0.2
2,496,376	-		DDA3937_RS11065	0.87	+0.1
2,496,376	-		DDA3937_RS11065	0.87	-0.2
2,496,396	-				-1.4
2,496,449	-				-1.7
2,496,496	+				-1.7
2,496,501	+				-1.3
2,496,501	+				+0.4
2,496,502	-				-0.7
2,496,502	-				-0.4
2,496,700	+				-1.9
2,496,700	+				+0.0
2,496,700	+				-0.2
2,496,701	-				-0.5
2,496,702	+				-0.3
2,496,702	+				-1.5
2,496,703	-				-0.4
2,496,737	-				-0.7
2,496,749	+				-0.4
2,496,812	+		DDA3937_RS11070	0.11	-1.0
2,496,812	+		DDA3937_RS11070	0.11	-0.5
2,496,812	+		DDA3937_RS11070	0.11	+1.4
2,496,812	+		DDA3937_RS11070	0.11	-2.2
2,496,814	+		DDA3937_RS11070	0.12	+0.5
2,496,815	-		DDA3937_RS11070	0.12	-0.1
2,496,815	-		DDA3937_RS11070	0.12	-2.4
2,496,815	-		DDA3937_RS11070	0.12	-0.5
2,496,815	-		DDA3937_RS11070	0.12	-0.4
2,496,815	-		DDA3937_RS11070	0.12	-0.6
2,496,816	+		DDA3937_RS11070	0.12	+0.0
2,496,816	+		DDA3937_RS11070	0.12	-0.6
2,496,816	+		DDA3937_RS11070	0.12	-0.9
2,496,816	+		DDA3937_RS11070	0.12	-0.8
2,496,817	-		DDA3937_RS11070	0.12	-0.2
2,496,817	-		DDA3937_RS11070	0.12	+0.1
2,496,922	+		DDA3937_RS11070	0.19	+0.2
2,496,968	+		DDA3937_RS11070	0.23	-1.4
2,496,969	-		DDA3937_RS11070	0.23	+0.2
2,496,969	-		DDA3937_RS11070	0.23	+0.9
2,496,997	+		DDA3937_RS11070	0.25	-1.0
2,496,997	+		DDA3937_RS11070	0.25	-1.5
2,497,154	+		DDA3937_RS11070	0.36	-0.8
2,497,203	+		DDA3937_RS11070	0.40	-0.3
2,497,222	-		DDA3937_RS11070	0.41	+1.1
2,497,224	+		DDA3937_RS11070	0.41	-0.6
2,497,245	-		DDA3937_RS11070	0.43	-0.7
2,497,283	+		DDA3937_RS11070	0.45	-1.0
2,497,428	-		DDA3937_RS11070	0.56	-1.4
2,497,428	-		DDA3937_RS11070	0.56	-0.5
2,497,428	-		DDA3937_RS11070	0.56	-0.2
2,497,429	+		DDA3937_RS11070	0.56	-1.7
2,497,429	+		DDA3937_RS11070	0.56	-0.0
2,497,429	+		DDA3937_RS11070	0.56	-1.8
2,497,488	+		DDA3937_RS11070	0.60	-1.1
2,497,488	+		DDA3937_RS11070	0.60	-0.1
2,497,488	+		DDA3937_RS11070	0.60	-0.4
2,497,489	-		DDA3937_RS11070	0.60	+0.9
2,497,498	+		DDA3937_RS11070	0.61	+0.4
2,497,498	+		DDA3937_RS11070	0.61	-1.7
2,497,498	+		DDA3937_RS11070	0.61	-1.5
2,497,498	+		DDA3937_RS11070	0.61	+1.0
2,497,604	+		DDA3937_RS11070	0.69	-0.7
2,497,719	-		DDA3937_RS11070	0.77	-0.9
2,497,719	-		DDA3937_RS11070	0.77	-0.3
2,497,737	-		DDA3937_RS11070	0.78	+0.1
2,497,806	+		DDA3937_RS11070	0.83	-0.6
2,497,816	+		DDA3937_RS11070	0.84	+0.6
2,497,816	+		DDA3937_RS11070	0.84	-2.1
2,497,816	+		DDA3937_RS11070	0.84	-1.0
2,497,816	+		DDA3937_RS11070	0.84	-1.4
2,497,816	+		DDA3937_RS11070	0.84	-1.1
2,497,816	+		DDA3937_RS11070	0.84	-0.8
2,497,817	-		DDA3937_RS11070	0.84	-0.5
2,497,817	-		DDA3937_RS11070	0.84	-0.7
2,497,817	-		DDA3937_RS11070	0.84	-1.0
2,497,817	-		DDA3937_RS11070	0.84	+0.0
2,497,817	-		DDA3937_RS11070	0.84	+0.0
2,497,817	-		DDA3937_RS11070	0.84	-0.5
2,497,820	+		DDA3937_RS11070	0.84	+0.0
2,497,820	+		DDA3937_RS11070	0.84	-0.6
2,497,821	-		DDA3937_RS11070	0.84	-1.0
2,497,821	-		DDA3937_RS11070	0.84	+0.2
2,497,821	-		DDA3937_RS11070	0.84	+0.3
2,497,861	+		DDA3937_RS11070	0.87	-1.4
2,497,889	+		DDA3937_RS11070	0.89	-0.8
2,497,889	+		DDA3937_RS11070	0.89	-0.7
2,497,889	+		DDA3937_RS11070	0.89	-3.5
2,497,890	-		DDA3937_RS11070	0.89	+0.1
2,497,890	-		DDA3937_RS11070	0.89	-2.2
2,497,891	+		DDA3937_RS11070	0.89	-1.3
2,497,891	+		DDA3937_RS11070	0.89	-0.3
2,497,892	-		DDA3937_RS11070	0.90	-0.7
2,497,892	-		DDA3937_RS11070	0.90	-0.5
2,497,892	-		DDA3937_RS11070	0.90	-0.6
2,497,897	+		DDA3937_RS11070	0.90	-1.3
2,497,936	-				-0.7
2,498,012	+				-0.0
2,498,013	-				+0.6
2,498,015	+				+0.8
2,498,016	-				-0.2
2,498,037	+				-0.8
2,498,040	+				-1.0
2,498,051	+				-1.3
2,498,072	+				-1.2
2,498,072	+				-1.1
2,498,073	-				-0.0
2,498,131	-				-0.1
2,498,164	-				+1.2
2,498,169	-				+0.0
2,498,217	-				-0.9
2,498,224	+				-1.0
2,498,224	+				+0.6
2,498,224	+				-1.5
2,498,224	+				-0.1
2,498,406	+				-0.2
2,498,774	-		DDA3937_RS11075	0.24	-2.0