Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10760

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,418,779	+		DDA3937_RS10750	0.68	+1.7
2,418,780	-		DDA3937_RS10750	0.68	-1.2
2,418,780	-		DDA3937_RS10750	0.68	+1.1
2,418,780	-		DDA3937_RS10750	0.68	+1.1
2,418,796	+				-0.3
2,418,797	-		DDA3937_RS10750	0.70	+0.7
2,418,836	+		DDA3937_RS10750	0.76	+1.9
2,418,836	+		DDA3937_RS10750	0.76	-0.2
2,418,836	+		DDA3937_RS10750	0.76	+0.3
2,418,836	+		DDA3937_RS10750	0.76	-0.4
2,418,836	+		DDA3937_RS10750	0.76	+0.3
2,418,836	+				+1.7
2,418,837	-		DDA3937_RS10750	0.76	+0.3
2,418,837	-		DDA3937_RS10750	0.76	-0.2
2,418,837	-		DDA3937_RS10750	0.76	-0.4
2,418,837	-		DDA3937_RS10750	0.76	-0.9
2,418,837	-		DDA3937_RS10750	0.76	-0.8
2,418,851	+		DDA3937_RS10750	0.78	-0.3
2,418,851	+		DDA3937_RS10750	0.78	+0.7
2,418,851	+		DDA3937_RS10750	0.78	-0.9
2,418,851	+		DDA3937_RS10750	0.78	-0.3
2,418,852	-		DDA3937_RS10750	0.78	-0.5
2,418,852	-		DDA3937_RS10750	0.78	-1.2
2,418,859	+		DDA3937_RS10750	0.79	+0.2
2,418,860	-		DDA3937_RS10750	0.79	-0.3
2,418,860	-		DDA3937_RS10750	0.79	-0.3
2,418,884	+		DDA3937_RS10750	0.83	+0.1
2,418,884	+		DDA3937_RS10750	0.83	-2.2
2,418,884	+		DDA3937_RS10750	0.83	+1.1
2,418,885	-		DDA3937_RS10750	0.83	+1.9
2,418,885	-		DDA3937_RS10750	0.83	+0.9
2,418,885	-		DDA3937_RS10750	0.83	+0.1
2,418,885	-		DDA3937_RS10750	0.83	-0.2
2,418,885	-		DDA3937_RS10750	0.83	-1.5
2,418,892	+		DDA3937_RS10750	0.84	+0.1
2,418,893	-		DDA3937_RS10750	0.84	-0.3
2,418,998	+				+0.4
2,418,998	+				-0.7
2,418,998	+				-0.6
2,418,999	-				-0.2
2,419,076	-				+0.8
2,419,091	-				-0.3
2,419,106	+				+0.2
2,419,107	-				-0.3
2,419,148	-				+1.1
2,419,148	-				+1.7
2,419,148	-				-1.1
2,419,151	+				-0.2
2,419,180	+				-1.2
2,419,317	+		DDA3937_RS10755	0.29	+0.3
2,419,443	+		DDA3937_RS10755	0.49	-0.5
2,419,444	-		DDA3937_RS10755	0.50	-2.0
2,419,461	-		DDA3937_RS10755	0.52	+0.6
2,419,683	+		DDA3937_RS10755	0.87	+0.7
2,419,701	+				-0.9
2,419,702	-				-0.7
2,419,759	+				+0.3
2,419,759	+				-0.9
2,419,759	+				+0.4
2,419,759	+				-0.9
2,419,759	+				-0.1
2,419,759	+				-0.4
2,419,759	+				-2.8
2,419,760	-				-2.4
2,419,760	-				+0.2
2,419,760	-				+0.1
2,419,760	-				-1.9
2,419,760	-				+1.3
2,419,843	+		DDA3937_RS10760	0.14	+0.6
2,419,843	+				+0.1
2,419,955	-		DDA3937_RS10760	0.32	-0.7
2,420,008	+		DDA3937_RS10760	0.41	+0.0
2,420,008	+		DDA3937_RS10760	0.41	+0.1
2,420,008	+		DDA3937_RS10760	0.41	+1.2
2,420,008	+		DDA3937_RS10760	0.41	+1.5
2,420,008	+		DDA3937_RS10760	0.41	+0.8
2,420,009	-		DDA3937_RS10760	0.41	-0.1
2,420,009	-		DDA3937_RS10760	0.41	+0.2
2,420,009	-		DDA3937_RS10760	0.41	-0.8
2,420,009	-		DDA3937_RS10760	0.41	-2.4
2,420,045	+		DDA3937_RS10760	0.47	+2.6
2,420,064	+		DDA3937_RS10760	0.50	+0.5
2,420,065	-		DDA3937_RS10760	0.50	+0.5
2,420,065	-		DDA3937_RS10760	0.50	+0.6
2,420,065	-		DDA3937_RS10760	0.50	-0.4
2,420,065	-		DDA3937_RS10760	0.50	-0.6
2,420,430	+				-1.4
2,420,430	+				-1.9
2,420,472	+				+0.2
2,420,562	+		DDA3937_RS10765	0.11	+0.6
2,420,563	-		DDA3937_RS10765	0.11	+0.2
2,420,563	-		DDA3937_RS10765	0.11	-0.4
2,420,563	-		DDA3937_RS10765	0.11	+0.4
2,420,566	+		DDA3937_RS10765	0.12	-1.0
2,420,567	-		DDA3937_RS10765	0.12	+0.1
2,420,589	-		DDA3937_RS10765	0.13	-0.0
2,420,598	+		DDA3937_RS10765	0.14	+0.1
2,420,598	+		DDA3937_RS10765	0.14	+2.0
2,420,598	+		DDA3937_RS10765	0.14	-3.1
2,420,598	+		DDA3937_RS10765	0.14	+0.6
2,420,693	+		DDA3937_RS10765	0.19	-0.4
2,420,736	+		DDA3937_RS10765	0.22	-0.7
2,420,756	-		DDA3937_RS10765	0.23	+0.6
2,420,756	-		DDA3937_RS10765	0.23	-0.0
2,420,756	-		DDA3937_RS10765	0.23	+0.2
2,420,756	-		DDA3937_RS10765	0.23	-1.7
2,420,756	-		DDA3937_RS10765	0.23	+0.1
2,420,776	+		DDA3937_RS10765	0.24	+1.2
2,420,776	+		DDA3937_RS10765	0.24	-1.7
2,420,803	-		DDA3937_RS10765	0.26	-0.3
2,420,905	+		DDA3937_RS10765	0.32	+1.1
2,420,908	+		DDA3937_RS10765	0.32	-0.1
2,420,976	-		DDA3937_RS10765	0.36	-0.3
2,420,998	+		DDA3937_RS10765	0.38	+0.8
2,420,998	+		DDA3937_RS10765	0.38	-1.2
2,421,054	-		DDA3937_RS10765	0.41	-0.5
2,421,144	+		DDA3937_RS10765	0.46	-1.6
2,421,145	-		DDA3937_RS10765	0.46	-0.5
2,421,156	+		DDA3937_RS10765	0.47	+0.4
2,421,171	+		DDA3937_RS10765	0.48	+0.2
2,421,171	+		DDA3937_RS10765	0.48	-0.4
2,421,272	+		DDA3937_RS10765	0.54	+0.6
2,421,272	+		DDA3937_RS10765	0.54	-0.9
2,421,272	+		DDA3937_RS10765	0.54	+0.1
2,421,273	-		DDA3937_RS10765	0.54	-0.8
2,421,273	-				-1.7
2,421,273	-		DDA3937_RS10765	0.54	-1.4
2,421,273	-		DDA3937_RS10765	0.54	+0.8
2,421,349	+		DDA3937_RS10765	0.59	+0.3
2,421,349	+		DDA3937_RS10765	0.59	-1.2
2,421,349	+		DDA3937_RS10765	0.59	+1.0
2,421,351	+		DDA3937_RS10765	0.59	-0.8
2,421,351	+		DDA3937_RS10765	0.59	+1.0
2,421,351	+		DDA3937_RS10765	0.59	+0.2
2,421,351	+		DDA3937_RS10765	0.59	-0.7