Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10745

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,416,276	-				-1.2
2,416,345	-				-2.3
2,416,356	-				+0.6
2,416,367	-				-0.4
2,416,367	-		DDA3937_RS10740	0.12	-0.3
2,416,394	+		DDA3937_RS10740	0.17	+0.2
2,416,394	+		DDA3937_RS10740	0.17	-1.3
2,416,394	+		DDA3937_RS10740	0.17	-0.4
2,416,394	+		DDA3937_RS10740	0.17	+0.9
2,416,395	-		DDA3937_RS10740	0.17	-0.4
2,416,395	-		DDA3937_RS10740	0.17	+0.5
2,416,417	+		DDA3937_RS10740	0.22	-1.6
2,416,632	+		DDA3937_RS10740	0.63	-0.4
2,416,753	+		DDA3937_RS10740	0.86	-1.3
2,416,845	-				-1.6
2,416,907	+				+0.6
2,416,910	+				-1.1
2,416,911	-				-0.6
2,416,978	+				-1.8
2,417,064	-				+1.1
2,417,085	-				+0.6
2,417,177	+				+0.8
2,417,231	+				+1.0
2,417,231	+				-0.0
2,417,232	-				+0.1
2,417,285	-				+0.5
2,417,365	+		DDA3937_RS10745	0.17	-0.9
2,417,384	-		DDA3937_RS10745	0.20	-2.2
2,417,447	+		DDA3937_RS10745	0.29	-0.6
2,417,498	+		DDA3937_RS10745	0.36	+0.1
2,417,507	+		DDA3937_RS10745	0.38	-2.8
2,417,518	-		DDA3937_RS10745	0.39	+0.8
2,417,531	-				+2.5
2,417,531	-		DDA3937_RS10745	0.41	-0.9
2,417,531	-		DDA3937_RS10745	0.41	+0.3
2,417,563	+		DDA3937_RS10745	0.46	+0.4
2,417,564	-		DDA3937_RS10745	0.46	-0.8
2,417,612	+		DDA3937_RS10745	0.53	-0.2
2,417,613	-		DDA3937_RS10745	0.53	+0.2
2,417,629	+		DDA3937_RS10745	0.55	+0.4
2,417,662	-		DDA3937_RS10745	0.60	-1.1
2,417,682	-		DDA3937_RS10745	0.63	-1.4
2,417,784	+		DDA3937_RS10745	0.78	+0.7
2,417,785	-		DDA3937_RS10745	0.78	-1.3
2,417,785	-		DDA3937_RS10745	0.78	-0.9
2,417,855	+		DDA3937_RS10745	0.88	-0.1
2,417,861	-		DDA3937_RS10745	0.89	-1.4
2,417,904	+				+0.1
2,417,905	-				-1.0
2,417,941	+				-0.3
2,417,966	-				-1.2
2,417,972	+				+0.1
2,418,030	-				-0.9
2,418,172	+				-0.3
2,418,173	-				+1.2
2,418,223	-				-1.4
2,418,264	+				-0.7
2,418,264	+				+0.5
2,418,266	+				-0.1
2,418,266	+				-0.2
2,418,267	-				-1.2
2,418,303	+				-0.9
2,418,303	+				-1.1
2,418,304	-				-0.1
2,418,304	-				+1.1
2,418,304	-				-0.1
2,418,318	+				-0.7
2,418,318	+				-0.3
2,418,337	+				+1.4
2,418,338	-				+1.4
2,418,338	-				+0.9
2,418,420	+		DDA3937_RS10750	0.15	-0.8
2,418,421	-		DDA3937_RS10750	0.15	+0.2
2,418,426	-		DDA3937_RS10750	0.16	+0.8
2,418,426	-		DDA3937_RS10750	0.16	-1.2
2,418,497	+		DDA3937_RS10750	0.26	-0.2
2,418,497	+		DDA3937_RS10750	0.26	-0.1
2,418,497	+		DDA3937_RS10750	0.26	+0.5
2,418,498	-		DDA3937_RS10750	0.26	-0.6
2,418,525	-		DDA3937_RS10750	0.30	-0.4
2,418,557	+		DDA3937_RS10750	0.35	-0.9
2,418,558	-		DDA3937_RS10750	0.35	+0.7
2,418,620	+		DDA3937_RS10750	0.44	+0.4
2,418,620	+		DDA3937_RS10750	0.44	-0.5
2,418,621	-		DDA3937_RS10750	0.44	-1.3
2,418,622	+		DDA3937_RS10750	0.45	+0.5
2,418,622	+		DDA3937_RS10750	0.45	+0.1
2,418,622	+		DDA3937_RS10750	0.45	-1.3
2,418,622	+		DDA3937_RS10750	0.45	-1.7
2,418,622	+		DDA3937_RS10750	0.45	+1.7
2,418,623	-		DDA3937_RS10750	0.45	+0.7
2,418,693	+		DDA3937_RS10750	0.55	-0.1
2,418,693	+		DDA3937_RS10750	0.55	-2.3
2,418,693	+		DDA3937_RS10750	0.55	+0.0
2,418,694	-		DDA3937_RS10750	0.55	-0.4
2,418,694	-		DDA3937_RS10750	0.55	+0.3
2,418,713	-		DDA3937_RS10750	0.58	+0.5
2,418,779	+		DDA3937_RS10750	0.68	+1.7
2,418,780	-		DDA3937_RS10750	0.68	-1.2
2,418,780	-		DDA3937_RS10750	0.68	+1.1
2,418,780	-		DDA3937_RS10750	0.68	+1.1
2,418,796	+				-0.3
2,418,797	-		DDA3937_RS10750	0.70	+0.7
2,418,836	+		DDA3937_RS10750	0.76	+1.9
2,418,836	+		DDA3937_RS10750	0.76	-0.2
2,418,836	+		DDA3937_RS10750	0.76	+0.3
2,418,836	+		DDA3937_RS10750	0.76	-0.4
2,418,836	+		DDA3937_RS10750	0.76	+0.3
2,418,836	+				+1.7
2,418,837	-		DDA3937_RS10750	0.76	+0.3
2,418,837	-		DDA3937_RS10750	0.76	-0.2
2,418,837	-		DDA3937_RS10750	0.76	-0.4
2,418,837	-		DDA3937_RS10750	0.76	-0.9
2,418,837	-		DDA3937_RS10750	0.76	-0.8
2,418,851	+		DDA3937_RS10750	0.78	-0.3
2,418,851	+		DDA3937_RS10750	0.78	+0.7
2,418,851	+		DDA3937_RS10750	0.78	-0.9
2,418,851	+		DDA3937_RS10750	0.78	-0.3
2,418,852	-		DDA3937_RS10750	0.78	-0.5
2,418,852	-		DDA3937_RS10750	0.78	-1.2
2,418,859	+		DDA3937_RS10750	0.79	+0.2
2,418,860	-		DDA3937_RS10750	0.79	-0.3
2,418,860	-		DDA3937_RS10750	0.79	-0.3
2,418,884	+		DDA3937_RS10750	0.83	+0.1
2,418,884	+		DDA3937_RS10750	0.83	-2.2
2,418,884	+		DDA3937_RS10750	0.83	+1.1
2,418,885	-		DDA3937_RS10750	0.83	+1.9
2,418,885	-		DDA3937_RS10750	0.83	+0.9
2,418,885	-		DDA3937_RS10750	0.83	+0.1
2,418,885	-		DDA3937_RS10750	0.83	-0.2
2,418,885	-		DDA3937_RS10750	0.83	-1.5
2,418,892	+		DDA3937_RS10750	0.84	+0.1
2,418,893	-		DDA3937_RS10750	0.84	-0.3