Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10410

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,345,752	-				-0.5
2,345,752	-				-0.5
2,345,798	-				+0.3
2,345,798	-				-0.3
2,345,798	-				+0.7
2,345,798	-				-0.5
2,345,798	-				+0.8
2,345,798	-				+0.1
2,345,798	-				-0.5
2,345,798	-				-1.7
2,345,804	-				+0.7
2,345,804	-				+0.2
2,345,804	-				+1.2
2,345,837	+				+0.1
2,345,837	+				-1.9
2,345,838	-				+0.3
2,345,840	+				-0.4
2,345,840	+				-0.3
2,345,840	+				+0.8
2,345,840	+				+0.5
2,345,840	+				-0.3
2,345,841	-				-0.3
2,345,841	-				-0.9
2,345,841	-				-0.8
2,345,842	+				+0.7
2,345,933	+				-0.5
2,345,933	+				-0.9
2,345,933	+				+0.3
2,345,934	-				-0.3
2,345,934	-				+0.5
2,345,934	-				+0.3
2,345,934	-				-0.6
2,345,934	-				-0.1
2,345,935	+				-1.8
2,345,935	+				-1.2
2,345,935	+				+1.2
2,345,935	+				-0.1
2,345,935	+				-0.7
2,345,935	+				-0.1
2,345,935	+				+0.4
2,345,935	+				+0.3
2,345,935	+				+0.7
2,345,936	-				+0.4
2,345,936	-				-0.6
2,345,936	-				-0.2
2,345,936	-				+0.0
2,345,936	-				+0.1
2,345,936	-				+0.1
2,345,943	+				+0.2
2,345,943	+				+0.4
2,345,944	-				+0.1
2,345,944	-				+0.2
2,345,944	-				+0.1
2,345,944	-				-0.1
2,345,944	-				-0.9
2,345,957	+				-0.2
2,345,957	+				-0.4
2,345,957	+				-1.0
2,345,957	+				-1.3
2,345,957	+				-0.0
2,345,957	+				-0.9
2,345,958	-				+0.4
2,345,958	-				-0.3
2,345,958	-				-0.1
2,345,958	-				-1.1
2,345,958	-				+0.1
2,345,960	+				-1.3
2,345,960	+				+1.5
2,345,960	+				-0.3
2,345,960	+				-0.3
2,345,960	+				+2.2
2,345,960	+				+0.6
2,345,960	+				+0.2
2,345,961	-				+1.2
2,345,961	-				-0.8
2,345,961	-				+0.0
2,345,963	+				-0.9
2,345,963	+				+1.3
2,345,964	-				+0.4
2,345,964	-				-0.3
2,345,989	+				+0.6
2,345,989	+				+0.1
2,345,989	+				-1.1
2,345,989	+				+1.2
2,345,989	+				+0.2
2,345,990	-				+0.6
2,345,990	-				+0.7
2,345,990	-				+0.4
2,345,990	-				+0.7
2,346,047	+		DDA3937_RS23170	0.20	-1.7
2,346,047	+		DDA3937_RS23170	0.20	-0.2
2,346,114	-		DDA3937_RS23170	0.58	-0.3
2,346,166	-		DDA3937_RS23170	0.87	-0.0
2,346,186	+				+1.2
2,346,187	-				-0.6
2,346,187	-				-0.6
2,346,191	-				+0.5
2,346,247	-				-1.9
2,346,249	-				-0.6
2,346,249	-				-0.1
2,346,264	-				+0.9
2,346,264	-				+1.1
2,346,575	-		DDA3937_RS10410	0.41	-0.1
2,346,575	-		DDA3937_RS10410	0.41	+0.3
2,346,575	-		DDA3937_RS10410	0.41	-2.2
2,346,575	-		DDA3937_RS10410	0.41	-1.2
2,346,575	-		DDA3937_RS10410	0.41	-0.5
2,346,910	+				+0.4
2,346,910	+				-0.9
2,346,918	+				-0.1
2,346,918	+				-2.3
2,346,947	+				+1.1
2,346,951	+				+0.3
2,346,951	+				+1.7
2,346,951	+				+0.2
2,346,951	+				+0.1
2,346,951	+				-1.7
2,346,951	+				+0.1
2,346,951	+				-0.2
2,346,951	+				+0.1
2,346,951	+				+0.1
2,347,005	-				-1.9
2,347,091	-				+0.7
2,347,123	+				-0.3
2,347,123	+				+0.5
2,347,180	-				+1.1
2,347,395	+		DDA3937_RS10415	0.25	+0.7
2,347,396	-		DDA3937_RS10415	0.25	+0.7
2,347,417	+		DDA3937_RS10415	0.26	+0.2
2,347,566	+		DDA3937_RS10415	0.35	-0.3
2,347,567	-		DDA3937_RS10415	0.35	-1.5
2,347,567	-		DDA3937_RS10415	0.35	+0.7
2,347,567	-		DDA3937_RS10415	0.35	+1.1
2,347,662	-		DDA3937_RS10415	0.41	-1.2
2,347,826	-		DDA3937_RS10415	0.50	+0.3
2,347,826	-		DDA3937_RS10415	0.50	+0.6