Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,168,864	+				-0.9
2,168,864	+				-0.0
2,168,907	+				+1.7
2,169,068	-				-1.2
2,169,080	-				-0.6
2,169,080	-				-0.3
2,169,080	-				-0.2
2,169,080	-				-0.5
2,169,080	-				-1.9
2,169,080	-				-0.1
2,169,115	-				+0.2
2,169,119	+				+0.2
2,169,119	+				+0.5
2,169,120	-				-1.1
2,169,122	+				-1.3
2,169,122	+				-0.8
2,169,123	-				+0.1
2,169,147	+		DDA3937_RS09615	0.13	+0.9
2,169,147	+		DDA3937_RS09615	0.13	+0.4
2,169,147	+		DDA3937_RS09615	0.13	-0.2
2,169,147	+		DDA3937_RS09615	0.13	-0.7
2,169,148	-		DDA3937_RS09615	0.13	-0.8
2,169,154	+		DDA3937_RS09615	0.14	+0.3
2,169,154	+		DDA3937_RS09615	0.14	+0.5
2,169,214	+		DDA3937_RS09615	0.24	-0.6
2,169,294	+		DDA3937_RS09615	0.37	-1.7
2,169,295	-		DDA3937_RS09615	0.37	+0.7
2,169,340	-		DDA3937_RS09615	0.44	-1.1
2,169,340	-		DDA3937_RS09615	0.44	-0.9
2,169,341	+		DDA3937_RS09615	0.44	+0.7
2,169,341	+		DDA3937_RS09615	0.44	+2.0
2,169,341	+		DDA3937_RS09615	0.44	+1.1
2,169,342	-		DDA3937_RS09615	0.45	-0.1
2,169,414	+		DDA3937_RS09615	0.56	+0.2
2,169,451	+		DDA3937_RS09615	0.62	+0.3
2,169,452	-		DDA3937_RS09615	0.62	+0.3
2,169,552	-		DDA3937_RS09615	0.79	-0.3
2,169,590	+		DDA3937_RS09615	0.85	-1.0
2,169,652	-				-0.5
2,169,768	-				+0.3
2,169,768	-				-0.7
2,169,768	-				-0.2
2,169,808	-				+1.0
2,169,837	+				-0.2
2,169,853	-				+0.1
2,169,853	-				-0.2
2,169,853	-				-1.3
2,170,061	+		DDA3937_RS09620	0.33	-0.1
2,170,172	+		DDA3937_RS09620	0.51	+0.9
2,170,173	-		DDA3937_RS09620	0.51	+1.3
2,170,253	+		DDA3937_RS09620	0.65	-0.6
2,170,265	-		DDA3937_RS09620	0.67	+0.4
2,170,377	-		DDA3937_RS09620	0.85	+0.1
2,170,377	-		DDA3937_RS09620	0.85	+0.9
2,170,384	+		DDA3937_RS09620	0.86	+0.7
2,170,384	+		DDA3937_RS09620	0.86	+0.5
2,170,385	-		DDA3937_RS09620	0.86	-2.0
2,170,420	+				-0.2
2,170,421	-				-0.8
2,170,421	-				-0.2
2,170,421	-				+0.3
2,170,538	+				-0.7
2,170,538	+				+0.3
2,170,538	+				+0.3
2,170,539	-				+0.0
2,170,569	+				+0.8
2,170,586	+				+0.1
2,170,647	+				+0.7
2,170,647	+				+0.2
2,170,648	-				-0.8
2,170,671	-				+0.0
2,170,677	+				-0.2
2,170,677	+				+1.7
2,170,677	+				-0.3
2,170,677	+				-0.2
2,170,678	-				+0.1
2,170,717	+		DDA3937_RS09625	0.11	+0.4
2,170,787	-		DDA3937_RS09625	0.22	+0.0
2,170,787	-				-1.6
2,170,787	-		DDA3937_RS09625	0.22	-0.7
2,170,811	-		DDA3937_RS09625	0.26	-0.6
2,170,844	-		DDA3937_RS09625	0.31	+0.2
2,170,935	+		DDA3937_RS09625	0.45	+1.7
2,170,935	+		DDA3937_RS09625	0.45	-0.7
2,170,936	-				-0.3
2,170,936	-		DDA3937_RS09625	0.45	+0.7
2,170,936	-		DDA3937_RS09625	0.45	+0.4
2,170,936	-		DDA3937_RS09625	0.45	-0.3
2,170,936	-		DDA3937_RS09625	0.45	-0.4
2,171,124	+		DDA3937_RS09625	0.74	+0.5
2,171,124	+				+2.3
2,171,124	+		DDA3937_RS09625	0.74	-0.2
2,171,124	+		DDA3937_RS09625	0.74	+0.9
2,171,125	-		DDA3937_RS09625	0.74	-0.9
2,171,125	-		DDA3937_RS09625	0.74	+0.1
2,171,245	-				+1.4
2,171,274	+				+2.0
2,171,274	+				+1.9
2,171,274	+				+0.5
2,171,274	+				+0.8
2,171,274	+				-0.1
2,171,274	+				+0.9
2,171,275	-				+0.3
2,171,275	-				-0.9
2,171,275	-				-0.4
2,171,275	-				-1.8
2,171,275	-				-0.2
2,171,275	-				+0.4
2,171,275	-				-1.1
2,171,279	+				+0.7
2,171,279	+				+2.8
2,171,279	+				-2.9
2,171,279	+				+0.9
2,171,280	-				-0.6
2,171,280	-				-0.6
2,171,280	-				-1.9
2,171,280	-				-0.3
2,171,280	-				+1.2
2,171,280	-				+0.4
2,171,294	+				-0.2
2,171,295	-				-1.0
2,171,295	-				+1.0
2,171,303	+				+0.4
2,171,303	+				+0.1
2,171,303	+				-0.7
2,171,304	-				-0.3
2,171,304	-				-0.9
2,171,426	-				-0.8
2,171,429	+				+0.3
2,171,429	+				-0.7
2,171,429	+				-1.3
2,171,430	-				-0.4
2,171,430	-				+0.7
2,171,436	+				+0.1
2,171,436	+				-0.0
2,171,437	-				-0.1
2,171,451	-				+2.3
2,171,466	-				+0.1