Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,085,176	+		DDA3937_RS09270	0.86	+0.6
2,085,176	+		DDA3937_RS09270	0.86	-0.0
2,085,176	+		DDA3937_RS09270	0.86	-0.1
2,085,176	+		DDA3937_RS09270	0.86	+0.2
2,085,176	+		DDA3937_RS09270	0.86	+1.3
2,085,176	+		DDA3937_RS09270	0.86	+0.8
2,085,177	-		DDA3937_RS09270	0.86	+1.1
2,085,177	-		DDA3937_RS09270	0.86	-0.4
2,085,177	-		DDA3937_RS09270	0.86	+0.7
2,085,177	-		DDA3937_RS09270	0.86	-0.0
2,085,177	-		DDA3937_RS09270	0.86	+0.9
2,085,345	+				+0.4
2,085,378	+				+0.5
2,085,378	+				+0.7
2,085,378	+				-1.2
2,085,378	+				-2.1
2,085,378	+				-2.1
2,085,378	+				+0.0
2,085,378	+				-1.6
2,085,378	+				-0.6
2,085,378	+				+0.9
2,085,378	+				-1.9
2,085,378	+				-0.7
2,085,378	+				-2.3
2,085,378	+				-0.9
2,085,379	-				-1.3
2,085,379	-				-0.6
2,085,379	-				-0.0
2,085,379	-				-0.3
2,085,379	-				+0.1
2,085,379	-				-0.7
2,085,383	+				-0.1
2,085,383	+				+0.7
2,085,383	+				-0.9
2,085,571	+				+0.7
2,085,571	+				+0.7
2,085,571	+				-0.0
2,085,572	-				-2.1
2,085,572	-				+0.1
2,085,572	-				+2.5
2,085,575	+				-0.0
2,085,664	+				-0.1
2,086,167	+				+1.7
2,086,168	-				-1.3
2,086,170	-				-1.6
2,086,170	-				-0.1
2,086,170	-				-0.3
2,086,170	-				-1.0
2,086,170	-				-0.8
2,086,298	-		DDA3937_RS09275	0.13	-0.3
2,086,402	+		DDA3937_RS09275	0.24	-0.0
2,086,405	+		DDA3937_RS09275	0.24	-0.5
2,086,524	+		DDA3937_RS09275	0.35	-1.6
2,086,613	-		DDA3937_RS09275	0.44	-0.4
2,086,675	+		DDA3937_RS09275	0.50	-1.0
2,086,675	+		DDA3937_RS09275	0.50	-1.9
2,086,696	-		DDA3937_RS09275	0.52	-1.5
2,086,830	-		DDA3937_RS09275	0.65	+0.9
2,086,854	-		DDA3937_RS09275	0.68	+0.3
2,086,856	-		DDA3937_RS09275	0.68	-0.6
2,086,999	+		DDA3937_RS09275	0.82	-1.9
2,087,087	-				-1.9
2,087,160	+				-3.2
2,087,181	+				-0.2
2,087,181	+				-0.6
2,087,207	-				-0.9
2,087,323	-				+0.8
2,087,392	+				+0.5
2,087,403	-				-0.3
2,087,403	-				-0.0
2,087,493	-				-0.3
2,087,525	+				-0.2
2,087,526	-				-1.1
2,087,553	+				+0.4
2,087,749	-		DDA3937_RS09280	0.20	-0.1
2,087,890	-		DDA3937_RS09280	0.28	+0.3
2,088,171	-		DDA3937_RS09280	0.44	+0.4