Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07905

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,789,524	+		DDA3937_RS07900	0.24	-0.2
1,789,596	+		DDA3937_RS07900	0.31	-0.3
1,789,597	-		DDA3937_RS07900	0.31	-0.2
1,789,597	-		DDA3937_RS07900	0.31	-0.1
1,789,641	+		DDA3937_RS07900	0.36	-0.0
1,789,641	+		DDA3937_RS07900	0.36	+0.3
1,789,642	-		DDA3937_RS07900	0.36	+0.3
1,789,645	+		DDA3937_RS07900	0.37	-0.6
1,789,645	+		DDA3937_RS07900	0.37	+1.2
1,789,645	+		DDA3937_RS07900	0.37	-0.6
1,789,645	+		DDA3937_RS07900	0.37	+0.8
1,789,646	-		DDA3937_RS07900	0.37	+0.4
1,789,646	-		DDA3937_RS07900	0.37	-0.2
1,789,646	-		DDA3937_RS07900	0.37	-0.8
1,789,912	+		DDA3937_RS07900	0.65	-0.8
1,789,912	+		DDA3937_RS07900	0.65	-0.3
1,789,912	+		DDA3937_RS07900	0.65	+0.2
1,789,913	-		DDA3937_RS07900	0.66	-0.2
1,790,234	+				-2.3
1,790,235	-				+0.2
1,790,235	-				-0.7
1,790,300	+				-0.3
1,790,301	-				+0.2
1,790,301	-				+0.4
1,790,301	-				-0.3
1,790,304	+				+0.2
1,790,305	-				-0.4
1,790,353	+				+1.0
1,790,354	-				+0.4
1,790,467	+				+0.8
1,790,517	+				-0.8
1,790,525	+				-1.7
1,790,525	+				+0.2
1,790,525	+				-0.7
1,790,525	+				-0.1
1,790,525	+				+0.0
1,790,526	-				-0.7
1,790,526	-				-0.3
1,790,526	-				-0.2
1,790,526	-				-0.7
1,790,526	-				+1.1
1,790,526	-				-1.4
1,790,526	-				-0.5
1,790,536	+				-0.9
1,790,537	-				+0.3
1,790,698	+		DDA3937_RS07905	0.33	+0.2
1,790,864	+		DDA3937_RS07905	0.65	+0.6
1,790,864	+		DDA3937_RS07905	0.65	-0.1
1,790,864	+				-0.6
1,790,865	-		DDA3937_RS07905	0.65	+0.3
1,790,865	-		DDA3937_RS07905	0.65	+0.9
1,790,933	+		DDA3937_RS07905	0.78	+0.8
1,790,933	+		DDA3937_RS07905	0.78	+0.6
1,790,933	+		DDA3937_RS07905	0.78	-1.0
1,790,933	+		DDA3937_RS07905	0.78	+1.3
1,790,933	+		DDA3937_RS07905	0.78	-0.7
1,790,933	+		DDA3937_RS07905	0.78	-0.2
1,790,934	-		DDA3937_RS07905	0.79	-0.1
1,790,934	-		DDA3937_RS07905	0.79	-2.9
1,791,188	-				+0.4
1,791,210	+				-0.4
1,791,211	-				+0.2
1,791,261	+				+1.2
1,791,332	-		DDA3937_RS07910	0.11	-0.6
1,791,332	-		DDA3937_RS07910	0.11	+0.8
1,791,378	+		DDA3937_RS07910	0.15	+1.2
1,791,396	+		DDA3937_RS07910	0.16	+0.2
1,791,396	+		DDA3937_RS07910	0.16	-0.1
1,791,782	-		DDA3937_RS07910	0.43	+0.2
1,791,782	-		DDA3937_RS07910	0.43	-0.2
1,791,804	+		DDA3937_RS07910	0.45	+0.2
1,791,804	+		DDA3937_RS07910	0.45	-1.4
1,791,804	+		DDA3937_RS07910	0.45	+2.1
1,791,805	-		DDA3937_RS07910	0.45	+0.1
1,791,805	-		DDA3937_RS07910	0.45	-0.2
1,791,805	-		DDA3937_RS07910	0.45	+0.5
1,791,854	-		DDA3937_RS07910	0.48	-0.5
1,791,862	+		DDA3937_RS07910	0.49	-1.8
1,791,862	+		DDA3937_RS07910	0.49	+2.1
1,791,862	+		DDA3937_RS07910	0.49	-0.8
1,791,863	-		DDA3937_RS07910	0.49	-1.1
1,791,863	-		DDA3937_RS07910	0.49	+3.4
1,791,863	-		DDA3937_RS07910	0.49	+0.3
1,791,863	-		DDA3937_RS07910	0.49	-0.7
1,791,863	-		DDA3937_RS07910	0.49	+0.0
1,791,863	-		DDA3937_RS07910	0.49	+0.5