Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,686,970	+		DDA3937_RS07470	0.56	+0.0
1,686,970	+		DDA3937_RS07470	0.56	+0.6
1,686,970	+		DDA3937_RS07470	0.56	+0.3
1,687,342	+		DDA3937_RS07470	0.74	+0.6
1,687,342	+		DDA3937_RS07470	0.74	-0.4
1,687,343	-		DDA3937_RS07470	0.74	-2.5
1,687,396	+		DDA3937_RS07470	0.77	-0.7
1,687,396	+		DDA3937_RS07470	0.77	+1.4
1,687,397	-		DDA3937_RS07470	0.77	-1.2
1,687,397	-		DDA3937_RS07470	0.77	+0.2
1,687,397	-				-0.2
1,687,436	-		DDA3937_RS07470	0.79	-0.2
1,687,436	-		DDA3937_RS07470	0.79	-0.7
1,687,469	+		DDA3937_RS07470	0.81	+0.8
1,687,469	+		DDA3937_RS07470	0.81	-0.5
1,687,470	-		DDA3937_RS07470	0.81	+0.8
1,687,470	-		DDA3937_RS07470	0.81	+1.5
1,687,538	-		DDA3937_RS07470	0.84	-0.8
1,687,538	-		DDA3937_RS07470	0.84	-0.8
1,687,550	-		DDA3937_RS07470	0.85	+1.3
1,687,550	-		DDA3937_RS07470	0.85	-1.2
1,687,779	+				+0.2
1,687,780	-				+0.4
1,687,804	+				+0.6
1,687,866	-				+1.6
1,687,866	-				-1.7
1,687,866	-				+0.1
1,687,868	+				-0.6
1,687,868	+				+0.0
1,687,868	+				-0.8
1,687,868	+				+0.0
1,687,868	+				-0.0
1,687,868	+				+0.9
1,687,869	-				-1.5
1,687,869	-				+1.2
1,687,869	-				-0.8
1,687,869	-				-1.1
1,687,869	-				+2.4
1,687,869	-				-0.2
1,687,983	+		DDA3937_RS07475	0.19	+1.1
1,687,984	-		DDA3937_RS07475	0.19	+0.8
1,687,984	-		DDA3937_RS07475	0.19	+1.0
1,687,984	-		DDA3937_RS07475	0.19	+0.8
1,688,242	+		DDA3937_RS07475	0.61	+0.2
1,688,272	+		DDA3937_RS07475	0.65	-0.3
1,688,273	-		DDA3937_RS07475	0.66	+0.8
1,688,339	+		DDA3937_RS07475	0.76	+0.1
1,688,340	-		DDA3937_RS07475	0.76	-0.5
1,688,340	-		DDA3937_RS07475	0.76	+0.8
1,688,340	-		DDA3937_RS07475	0.76	-2.4
1,688,340	-		DDA3937_RS07475	0.76	+0.2
1,688,489	-				+0.3
1,688,509	+				+0.3
1,688,535	+				+0.5
1,688,536	-				-2.7
1,688,536	-				-0.2
1,688,536	-				+1.4
1,688,639	+				+0.3
1,688,640	-				+0.3
1,688,640	-				-1.2
1,688,743	+				-1.7
1,688,743	+				+0.0
1,688,743	+				-2.8
1,688,748	+				-1.0
1,688,748	+				-0.4
1,688,748	+				-1.2
1,688,749	-				-0.1
1,688,749	-				-0.2
1,688,749	-				-0.8
1,688,764	+				+2.1
1,688,838	+				+1.0
1,688,839	-				+1.8
1,688,839	-				-0.6
1,688,839	-				-0.5
1,688,871	+				-0.6
1,688,871	+				+1.4
1,688,887	-				+0.8
1,688,887	-				-0.9
1,688,887	-				-0.5
1,689,180	+				-2.0
1,689,181	-				-0.8
1,689,181	-				-1.0
1,689,229	-				-0.9
1,689,280	+				-0.5
1,689,280	+				-1.7
1,689,280	+				+0.1
1,689,281	-				-1.0
1,689,281	-				+0.2
1,689,281	-				+0.4
1,689,281	-				-0.0
1,689,281	-				-0.1
1,689,312	+				+0.2
1,689,360	-				-1.5
1,689,360	-				-1.2
1,689,385	+				+0.0
1,689,385	+				-0.7
1,689,385	+				-1.0
1,689,386	-				+0.1
1,689,386	-				+1.4
1,689,386	-				-0.6
1,689,410	+				-1.0
1,689,410	+				+0.4
1,689,410	+				-1.2
1,689,410	+				-1.2
1,689,410	+				+0.4
1,689,411	-				+0.1
1,689,411	-				-2.0
1,689,411	-				+0.4
1,689,411	-				+0.9
1,689,431	+				+0.4
1,689,431	+				-0.5
1,689,431	+				+2.8
1,689,432	-				-1.0
1,689,432	-				+0.3
1,689,432	-				-0.3
1,689,437	+				-0.1
1,689,437	+				-0.3
1,689,437	+				+0.1
1,689,437	+				-0.0
1,689,437	+				-0.4
1,689,437	+				+1.1
1,689,437	+				+0.2
1,689,438	-				-0.8
1,689,438	-				-0.2