Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07455

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,681,930	+		DDA3937_RS07450	0.51	+0.3
1,681,931	-		DDA3937_RS07450	0.51	-1.1
1,681,931	-		DDA3937_RS07450	0.51	-0.1
1,681,931	-		DDA3937_RS07450	0.51	-0.1
1,682,185	+		DDA3937_RS07450	0.67	-0.5
1,682,185	+		DDA3937_RS07450	0.67	+0.3
1,682,194	-		DDA3937_RS07450	0.67	-0.5
1,682,242	+		DDA3937_RS07450	0.70	+0.3
1,682,242	+		DDA3937_RS07450	0.70	-0.2
1,682,242	+		DDA3937_RS07450	0.70	+1.1
1,682,242	+		DDA3937_RS07450	0.70	-0.1
1,682,242	+				-1.5
1,682,243	-		DDA3937_RS07450	0.70	-1.8
1,682,243	-		DDA3937_RS07450	0.70	+0.5
1,682,243	-		DDA3937_RS07450	0.70	-0.5
1,682,243	-		DDA3937_RS07450	0.70	+2.0
1,682,243	-		DDA3937_RS07450	0.70	-0.2
1,682,399	-		DDA3937_RS07450	0.79	+0.5
1,682,401	+		DDA3937_RS07450	0.79	+0.2
1,682,401	+		DDA3937_RS07450	0.79	+0.1
1,682,401	+		DDA3937_RS07450	0.79	+0.4
1,682,402	-		DDA3937_RS07450	0.80	+0.4
1,682,453	+		DDA3937_RS07450	0.83	+0.8
1,682,453	+		DDA3937_RS07450	0.83	+1.4
1,682,453	+		DDA3937_RS07450	0.83	-0.2
1,682,454	-		DDA3937_RS07450	0.83	-0.0
1,682,454	-		DDA3937_RS07450	0.83	-0.3
1,682,454	-		DDA3937_RS07450	0.83	+0.5
1,682,455	+		DDA3937_RS07450	0.83	-1.5
1,682,455	+		DDA3937_RS07450	0.83	-3.0
1,682,455	+		DDA3937_RS07450	0.83	-1.5
1,682,456	-		DDA3937_RS07450	0.83	-0.3
1,682,456	-		DDA3937_RS07450	0.83	+0.5
1,682,456	-		DDA3937_RS07450	0.83	-0.5
1,682,456	-		DDA3937_RS07450	0.83	+0.6
1,682,456	-		DDA3937_RS07450	0.83	-1.6
1,682,572	+		DDA3937_RS07450	0.90	-0.0
1,682,572	+				+2.8
1,682,573	-		DDA3937_RS07450	0.90	+0.4
1,682,573	-				-0.8
1,683,073	-		DDA3937_RS07455	0.50	-0.8
1,683,073	-		DDA3937_RS07455	0.50	-0.1
1,683,176	-		DDA3937_RS07455	0.65	+0.2
1,683,176	-		DDA3937_RS07455	0.65	+0.8
1,683,176	-		DDA3937_RS07455	0.65	+0.2
1,683,176	-		DDA3937_RS07455	0.65	+0.0
1,683,194	+		DDA3937_RS07455	0.68	+0.8
1,683,195	-		DDA3937_RS07455	0.68	-0.1
1,683,195	-		DDA3937_RS07455	0.68	-0.9
1,683,195	-				-0.5
1,683,195	-		DDA3937_RS07455	0.68	+0.8
1,683,228	+		DDA3937_RS07455	0.73	+0.5
1,683,228	+		DDA3937_RS07455	0.73	+0.4
1,683,228	+		DDA3937_RS07455	0.73	+0.9
1,683,228	+		DDA3937_RS07455	0.73	+0.8
1,683,228	+		DDA3937_RS07455	0.73	+0.2
1,683,229	-		DDA3937_RS07455	0.74	+0.2
1,683,229	-		DDA3937_RS07455	0.74	+0.2
1,683,300	+		DDA3937_RS07455	0.84	-0.2
1,683,300	+		DDA3937_RS07455	0.84	-1.0
1,683,411	+				+0.3
1,683,412	-				+0.6
1,683,412	-				-0.8
1,683,458	+				-0.6
1,683,458	+				-1.1
1,683,668	-		DDA3937_RS07460	0.18	+0.3
1,683,693	-		DDA3937_RS07460	0.20	-0.5
1,683,765	-		DDA3937_RS07460	0.25	-0.2
1,683,795	+		DDA3937_RS07460	0.27	+0.0
1,683,796	-		DDA3937_RS07460	0.27	-0.5
1,683,796	-		DDA3937_RS07460	0.27	-0.8
1,683,796	-		DDA3937_RS07460	0.27	-0.2
1,683,837	+				+0.8
1,683,838	-		DDA3937_RS07460	0.30	+1.8
1,683,838	-		DDA3937_RS07460	0.30	-0.4
1,683,838	-		DDA3937_RS07460	0.30	+0.8
1,683,838	-		DDA3937_RS07460	0.30	+1.5
1,683,855	+		DDA3937_RS07460	0.31	-1.5
1,683,855	+		DDA3937_RS07460	0.31	-0.9
1,683,855	+		DDA3937_RS07460	0.31	-0.4
1,683,855	+		DDA3937_RS07460	0.31	-0.2
1,683,855	+		DDA3937_RS07460	0.31	-0.9
1,683,856	-		DDA3937_RS07460	0.31	-1.1
1,683,856	-		DDA3937_RS07460	0.31	-0.3
1,683,856	-		DDA3937_RS07460	0.31	-2.2
1,683,856	-		DDA3937_RS07460	0.31	+1.0
1,683,921	+		DDA3937_RS07460	0.35	+0.5
1,683,921	+		DDA3937_RS07460	0.35	+0.5
1,683,921	+		DDA3937_RS07460	0.35	-1.7
1,683,945	+		DDA3937_RS07460	0.37	-0.6
1,683,945	+		DDA3937_RS07460	0.37	+0.2
1,683,981	+		DDA3937_RS07460	0.40	-0.8
1,683,981	+				+0.8
1,683,981	+		DDA3937_RS07460	0.40	-2.5
1,683,981	+		DDA3937_RS07460	0.40	+0.5
1,683,981	+		DDA3937_RS07460	0.40	-0.8
1,683,982	-		DDA3937_RS07460	0.40	-0.8
1,683,996	+		DDA3937_RS07460	0.41	-1.7
1,683,997	-		DDA3937_RS07460	0.41	+0.8
1,683,997	-		DDA3937_RS07460	0.41	+0.8
1,683,997	-		DDA3937_RS07460	0.41	-0.2
1,684,006	+		DDA3937_RS07460	0.41	-0.1
1,684,084	+		DDA3937_RS07460	0.47	+1.5
1,684,085	-		DDA3937_RS07460	0.47	-0.2
1,684,085	-		DDA3937_RS07460	0.47	-1.0
1,684,086	+		DDA3937_RS07460	0.47	-0.4
1,684,087	-		DDA3937_RS07460	0.47	-0.1
1,684,087	-		DDA3937_RS07460	0.47	-0.3
1,684,240	+		DDA3937_RS07460	0.58	-0.1
1,684,241	-		DDA3937_RS07460	0.58	-0.4
1,684,311	+		DDA3937_RS07460	0.63	-0.1
1,684,312	-		DDA3937_RS07460	0.63	-0.8
1,684,312	-		DDA3937_RS07460	0.63	+0.1
1,684,312	-		DDA3937_RS07460	0.63	+0.5
1,684,387	-		DDA3937_RS07460	0.68	-0.5