Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07325

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,651,343	+		DDA3937_RS07320	0.28	-0.8
1,651,343	+		DDA3937_RS07320	0.28	+1.0
1,651,344	-		DDA3937_RS07320	0.28	-0.9
1,651,349	-		DDA3937_RS07320	0.28	-1.1
1,651,386	+		DDA3937_RS07320	0.33	+0.5
1,651,387	-		DDA3937_RS07320	0.33	-0.7
1,651,508	+		DDA3937_RS07320	0.46	-1.2
1,651,545	+		DDA3937_RS07320	0.50	-0.2
1,651,596	-		DDA3937_RS07320	0.56	-2.0
1,651,596	-		DDA3937_RS07320	0.56	-0.6
1,651,649	-		DDA3937_RS07320	0.62	-1.2
1,651,649	-		DDA3937_RS07320	0.62	-0.5
1,651,708	+		DDA3937_RS07320	0.68	-1.0
1,651,716	+		DDA3937_RS07320	0.69	+0.1
1,651,717	-		DDA3937_RS07320	0.69	+0.5
1,651,780	-		DDA3937_RS07320	0.76	+0.4
1,651,789	+		DDA3937_RS07320	0.77	+0.5
1,651,790	-		DDA3937_RS07320	0.77	+0.6
1,651,800	+		DDA3937_RS07320	0.79	-0.7
1,651,801	-		DDA3937_RS07320	0.79	-1.2
1,651,815	+		DDA3937_RS07320	0.80	-0.3
1,651,816	-		DDA3937_RS07320	0.80	-0.6
1,651,816	-		DDA3937_RS07320	0.80	-1.9
1,651,826	-		DDA3937_RS07320	0.81	+0.3
1,651,827	+		DDA3937_RS07320	0.82	-0.6
1,651,827	+		DDA3937_RS07320	0.82	-0.4
1,651,828	-				-0.8
1,651,857	+		DDA3937_RS07320	0.85	+0.1
1,651,876	+		DDA3937_RS07320	0.87	-1.7
1,651,876	+		DDA3937_RS07320	0.87	-1.0
1,651,876	+		DDA3937_RS07320	0.87	-0.2
1,651,876	+				+2.1
1,651,877	-		DDA3937_RS07320	0.87	-2.4
1,651,877	-		DDA3937_RS07320	0.87	-0.2
1,651,877	-		DDA3937_RS07320	0.87	-0.3
1,651,879	-		DDA3937_RS07320	0.87	-1.5
1,651,966	+				-1.0
1,651,967	-				+0.5
1,651,969	+				-0.5
1,651,969	+				-1.2
1,651,969	+				+0.3
1,651,969	+				-1.7
1,651,969	+				+0.0
1,651,969	+				-0.5
1,651,969	+				+1.2
1,651,970	-				-0.5
1,651,970	-				-1.3
1,651,970	-				+0.0
1,651,970	-				-0.5
1,651,971	+				+0.0
1,651,972	-				-2.2
1,651,972	-				+1.3
1,651,972	-				+1.5
1,651,991	-				-0.6
1,651,998	+				-0.3
1,651,998	+				-1.5
1,651,999	-				+0.3
1,652,001	-				-0.6
1,652,001	-				-0.6
1,652,005	+				+0.4
1,652,006	-				-0.1
1,652,010	-				+0.5
1,652,015	-				-1.5
1,652,085	-				-0.3
1,652,085	-				-1.0
1,652,185	+				-0.9
1,652,185	+				-1.2
1,652,185	+				+0.5
1,652,185	+				-0.6
1,652,185	+				-1.8
1,652,186	-				-1.2
1,652,188	+				+0.8
1,652,189	-				-0.2
1,652,189	-				-0.7
1,652,189	-				-0.8
1,652,194	+				+0.3
1,652,250	+				+0.8
1,652,250	+				-0.5
1,652,250	+				+0.8
1,652,251	-				-0.5
1,652,251	-				-0.7
1,652,251	-				+0.5
1,652,251	-				+0.5
1,652,251	-				+0.4
1,652,251	-				+0.3
1,652,252	+				-0.0
1,652,252	+				-0.6
1,652,253	-				-1.0
1,652,253	-				+0.1
1,652,253	-				-1.0
1,652,253	-				+0.1
1,652,284	-				-0.9
1,652,300	+				-0.4
1,652,301	-				-1.4
1,652,301	-				-0.9
1,652,312	+				-0.5
1,652,313	-				+0.6
1,652,313	-				+0.1
1,652,319	+				+0.8
1,652,320	-				+1.3
1,652,320	-				-0.0
1,652,511	+		DDA3937_RS07325	0.45	+0.8
1,652,522	-		DDA3937_RS07325	0.47	-1.4
1,652,526	+		DDA3937_RS07325	0.48	-1.8
1,652,526	+		DDA3937_RS07325	0.48	-1.3
1,652,566	-		DDA3937_RS07325	0.56	+0.8
1,652,587	-		DDA3937_RS07325	0.60	-0.1
1,652,632	+		DDA3937_RS07325	0.70	+2.5
1,652,632	+				+0.1
1,652,632	+		DDA3937_RS07325	0.70	-0.3
1,652,633	-		DDA3937_RS07325	0.70	-2.1
1,652,634	+		DDA3937_RS07325	0.70	-1.1
1,652,635	-		DDA3937_RS07325	0.70	-1.2
1,652,635	-		DDA3937_RS07325	0.70	-1.3
1,652,635	-		DDA3937_RS07325	0.70	-1.4
1,652,635	-				+0.2
1,652,681	+		DDA3937_RS07325	0.80	+0.2
1,652,748	-				-0.2
1,652,842	-				+0.5
1,652,844	+				-0.5
1,652,845	-				+0.4
1,652,845	-				-2.0
1,652,860	+				+0.7
1,652,864	+				-0.4
1,652,864	+				+0.8
1,652,965	-				-0.4
1,652,969	+				-2.7
1,652,982	+		DDA3937_RS07330	0.10	-1.8
1,652,982	+		DDA3937_RS07330	0.10	-0.8
1,652,982	+		DDA3937_RS07330	0.10	-1.4
1,652,983	-		DDA3937_RS07330	0.11	-1.0
1,652,983	-		DDA3937_RS07330	0.11	+1.3
1,652,984	+		DDA3937_RS07330	0.11	-2.2
1,652,985	-		DDA3937_RS07330	0.11	-0.1
1,652,986	+		DDA3937_RS07330	0.11	-0.3
1,652,987	-		DDA3937_RS07330	0.11	+0.3
1,652,987	-		DDA3937_RS07330	0.11	+0.6
1,653,034	+		DDA3937_RS07330	0.19	-1.0
1,653,063	+		DDA3937_RS07330	0.24	-0.6
1,653,082	-		DDA3937_RS07330	0.27	-1.0
1,653,245	-		DDA3937_RS07330	0.55	-0.6
1,653,249	+		DDA3937_RS07330	0.56	-0.8
1,653,249	+		DDA3937_RS07330	0.56	+0.6
1,653,297	+		DDA3937_RS07330	0.64	-2.3
1,653,338	-		DDA3937_RS07330	0.71	-1.2
1,653,518	-				+1.6
1,653,520	-				+0.2
1,653,538	-				+0.1
1,653,539	+				+1.9
1,653,539	+				-0.1
1,653,575	+				+1.0
1,653,737	+				-1.0
1,653,738	-				-0.7
1,653,738	-				-0.7
1,653,738	-				-0.3
1,653,738	-				-1.2
1,653,738	-				-0.9
1,653,739	+				-1.2
1,653,740	-				-2.5
1,653,740	-				+1.1