Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07235

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,629,292	+		DDA3937_RS07225	0.43	+0.8
1,629,292	+		DDA3937_RS07225	0.43	-0.7
1,629,293	-		DDA3937_RS07225	0.43	-0.3
1,629,459	+		DDA3937_RS07225	0.67	-0.7
1,629,459	+		DDA3937_RS07225	0.67	-0.1
1,629,459	+		DDA3937_RS07225	0.67	-0.9
1,629,460	-		DDA3937_RS07225	0.67	+0.2
1,629,460	-		DDA3937_RS07225	0.67	+0.3
1,629,460	-		DDA3937_RS07225	0.67	-0.0
1,629,460	-		DDA3937_RS07225	0.67	-0.0
1,629,460	-		DDA3937_RS07225	0.67	-0.3
1,629,537	+		DDA3937_RS07225	0.78	+0.2
1,629,537	+		DDA3937_RS07225	0.78	-0.3
1,629,599	+		DDA3937_RS07225	0.87	+0.4
1,629,734	+		DDA3937_RS07230	0.13	-0.4
1,629,735	-		DDA3937_RS07230	0.13	-0.4
1,629,735	-		DDA3937_RS07230	0.13	+0.5
1,629,844	+		DDA3937_RS07230	0.39	-0.7
1,629,845	-		DDA3937_RS07230	0.39	-0.2
1,629,887	+		DDA3937_RS07230	0.49	-1.2
1,629,887	+		DDA3937_RS07230	0.49	-1.5
1,629,888	-		DDA3937_RS07230	0.50	+0.3
1,629,888	-		DDA3937_RS07230	0.50	+0.7
1,629,888	-		DDA3937_RS07230	0.50	+0.4
1,629,889	+		DDA3937_RS07230	0.50	-0.3
1,629,890	-		DDA3937_RS07230	0.50	+0.8
1,630,030	+		DDA3937_RS07230	0.84	-0.2
1,630,030	+		DDA3937_RS07230	0.84	+0.5
1,630,030	+		DDA3937_RS07230	0.84	-1.2
1,630,031	-		DDA3937_RS07230	0.84	+1.0
1,630,031	-		DDA3937_RS07230	0.84	+0.3
1,630,031	-		DDA3937_RS07230	0.84	-0.4
1,630,031	-		DDA3937_RS07230	0.84	-2.9
1,630,031	-		DDA3937_RS07230	0.84	-1.1
1,630,032	-		DDA3937_RS07230	0.84	-0.8
1,630,042	+		DDA3937_RS07230	0.87	+0.8
1,630,043	-		DDA3937_RS07230	0.87	-1.3
1,630,043	-		DDA3937_RS07230	0.87	-0.0
1,630,086	-				+0.6
1,630,091	+				-0.2
1,630,098	+				-0.1
1,630,144	+				+1.3
1,630,144	+				+0.3
1,630,168	+				-0.5
1,630,169	-				-0.0
1,630,216	+				-0.1
1,630,235	+				-2.2
1,630,235	+				-0.2
1,630,235	+				-0.3
1,630,235	+				-0.2
1,630,235	+				-0.7
1,630,235	+				-0.4
1,630,235	+				-0.4
1,630,235	+				-0.7
1,630,235	+				-0.0
1,630,235	+				-0.1
1,630,235	+				-1.2
1,630,235	+				-0.1
1,630,235	+				-0.7
1,630,235	+				-0.8
1,630,235	+				-0.7
1,630,236	-				+0.6
1,630,236	-				+0.5
1,630,236	-				+0.3
1,630,236	-				+0.2
1,630,236	-				-0.2
1,630,236	-				+1.4
1,630,236	-				+0.2
1,630,236	-				-0.1
1,630,236	-				-0.6
1,630,325	+		DDA3937_RS07235	0.15	+0.8
1,630,603	+		DDA3937_RS07235	0.57	-0.4
1,630,603	+		DDA3937_RS07235	0.57	-0.9
1,630,727	-		DDA3937_RS07235	0.76	-1.8
1,630,822	+				+1.1
1,630,823	-				-0.2
1,630,824	+				-0.3
1,630,824	+				-1.3
1,630,824	+				-0.1
1,630,824	+				-0.7
1,630,824	+				+0.8
1,630,824	+				-0.2
1,630,824	+				-0.3
1,630,825	-				-0.7
1,630,825	-				-0.5
1,630,825	-				-0.6
1,630,915	+				-0.3
1,630,915	+				+1.5
1,630,922	+				+0.1
1,631,202	+		DDA3937_RS07240	0.31	-0.3
1,631,202	+		DDA3937_RS07240	0.31	+1.1
1,631,203	-		DDA3937_RS07240	0.32	+0.3
1,631,203	-		DDA3937_RS07240	0.32	-0.8
1,631,203	-		DDA3937_RS07240	0.32	-1.5
1,631,273	+		DDA3937_RS07240	0.38	-0.6
1,631,274	-		DDA3937_RS07240	0.38	+0.8
1,631,274	-		DDA3937_RS07240	0.38	-0.2
1,631,508	-		DDA3937_RS07240	0.60	-0.1
1,631,568	+		DDA3937_RS07240	0.65	+1.3
1,631,644	+		DDA3937_RS07240	0.72	+0.2
1,631,657	+		DDA3937_RS07240	0.73	-0.1
1,631,724	-		DDA3937_RS07240	0.80	-0.7
1,631,725	+		DDA3937_RS07240	0.80	+1.5
1,631,725	+		DDA3937_RS07240	0.80	+0.5
1,631,725	+		DDA3937_RS07240	0.80	-0.2
1,631,725	+		DDA3937_RS07240	0.80	-2.2
1,631,726	-		DDA3937_RS07240	0.80	-0.9
1,631,726	-		DDA3937_RS07240	0.80	-0.5
1,631,726	-		DDA3937_RS07240	0.80	+0.5
1,631,726	-		DDA3937_RS07240	0.80	-0.6
1,631,805	+		DDA3937_RS07240	0.87	+0.2
1,631,806	-		DDA3937_RS07240	0.87	-2.0
1,631,806	-		DDA3937_RS07240	0.87	+0.1
1,631,806	-		DDA3937_RS07240	0.87	-1.7
1,631,806	-		DDA3937_RS07240	0.87	-0.1