Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06770
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,514,561 | - | DDA3937_RS23075 | 0.47 | -0.1 | |
1,514,627 | + | DDA3937_RS23075 | 0.52 | -0.5 | |
1,514,789 | - | DDA3937_RS23075 | 0.63 | -0.6 | |
1,514,906 | - | DDA3937_RS23075 | 0.71 | +1.4 | |
1,515,067 | - | DDA3937_RS23075 | 0.82 | -0.6 | |
1,515,276 | + | -0.0 | |||
1,515,337 | + | -0.6 | |||
1,515,360 | + | +0.2 | |||
1,515,446 | + | -1.5 | |||
1,515,459 | + | -0.6 | |||
1,515,600 | - | DDA3937_RS06770 | 0.10 | -0.1 | |
1,515,630 | + | DDA3937_RS06770 | 0.13 | -1.7 | |
1,515,747 | + | DDA3937_RS06770 | 0.22 | -0.7 | |
1,516,182 | - | DDA3937_RS06770 | 0.56 | -0.9 | |
1,516,237 | + | DDA3937_RS06770 | 0.61 | -0.1 | |
1,516,689 | + | -2.3 | |||
1,516,698 | + | +0.9 | |||
1,516,758 | + | +0.6 | |||
1,516,759 | - | -1.0 | |||
1,517,095 | + | DDA3937_RS06775 | 0.36 | -1.8 | |
1,517,319 | + | DDA3937_RS06775 | 0.58 | +0.9 | |
1,517,554 | + | DDA3937_RS06775 | 0.82 | -0.6 |
Or see this region's nucleotide sequence