Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06040

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,360,267	+		DDA3937_RS06035	0.44	+0.3
1,360,356	+		DDA3937_RS06035	0.51	-1.1
1,360,356	+		DDA3937_RS06035	0.51	+1.5
1,360,454	+		DDA3937_RS06035	0.58	-0.3
1,360,557	-		DDA3937_RS06035	0.66	+0.4
1,360,557	-		DDA3937_RS06035	0.66	-0.1
1,360,563	+		DDA3937_RS06035	0.67	-0.5
1,360,563	+		DDA3937_RS06035	0.67	+0.2
1,360,563	+		DDA3937_RS06035	0.67	+0.3
1,360,563	+		DDA3937_RS06035	0.67	-1.6
1,360,564	-		DDA3937_RS06035	0.67	+0.1
1,360,564	-		DDA3937_RS06035	0.67	+0.2
1,360,602	+		DDA3937_RS06035	0.70	+1.5
1,360,661	+		DDA3937_RS06035	0.74	-0.6
1,360,779	+		DDA3937_RS06035	0.83	-1.3
1,360,779	+		DDA3937_RS06035	0.83	+0.9
1,360,780	-		DDA3937_RS06035	0.84	-0.5
1,360,780	-		DDA3937_RS06035	0.84	+0.5
1,360,781	+		DDA3937_RS06035	0.84	-0.8
1,360,781	+		DDA3937_RS06035	0.84	+0.8
1,360,781	+		DDA3937_RS06035	0.84	+0.4
1,360,782	-		DDA3937_RS06035	0.84	+0.2
1,360,782	-		DDA3937_RS06035	0.84	-0.6
1,360,782	-		DDA3937_RS06035	0.84	+0.9
1,360,782	-		DDA3937_RS06035	0.84	-2.6
1,360,782	-		DDA3937_RS06035	0.84	-1.6
1,360,782	-		DDA3937_RS06035	0.84	-0.4
1,360,996	-				-0.1
1,361,066	+				-0.3
1,361,066	+				+0.1
1,361,066	+				+1.3
1,361,066	+				-0.4
1,361,066	+				-0.4
1,361,067	-				-0.4
1,361,067	-				-0.6
1,361,067	-				+0.3
1,361,067	-				-0.2
1,361,071	+				+0.4
1,361,071	+				-0.4
1,361,071	+				-0.4
1,361,071	+				-0.9
1,361,072	-				-1.2
1,361,132	+				+0.2
1,361,146	+				+0.2
1,361,245	+		DDA3937_RS06040	0.19	-1.4
1,361,245	+		DDA3937_RS06040	0.19	-2.2
1,361,245	+		DDA3937_RS06040	0.19	-0.1
1,361,245	+		DDA3937_RS06040	0.19	+0.9
1,361,246	-		DDA3937_RS06040	0.20	-0.1
1,361,246	-		DDA3937_RS06040	0.20	-0.4
1,361,362	+				-0.6
1,361,695	-		DDA3937_RS06040	0.83	-0.1
1,361,719	-				-0.6
1,361,773	-				-0.4
1,361,773	-				-0.1
1,361,832	+				+0.7
1,361,865	+		DDA3937_RS06045	0.11	-0.9
1,361,917	+		DDA3937_RS06045	0.26	-0.8
1,362,077	+		DDA3937_RS06045	0.71	-1.9
1,362,153	+				-1.1
1,362,158	+				-0.9
1,362,159	-				-1.4
1,362,159	-				+0.1
1,362,159	-				-0.4
1,362,174	+				-0.5
1,362,175	-				+0.6
1,362,182	+				-0.2
1,362,182	+				-0.2
1,362,182	+				-0.6
1,362,182	+				+0.9
1,362,182	+				-1.7
1,362,183	-				+0.8
1,362,183	-				-1.6
1,362,415	-		DDA3937_RS06050	0.15	+0.8
1,362,415	-		DDA3937_RS06050	0.15	+0.3
1,362,448	+		DDA3937_RS06050	0.17	+0.3
1,362,449	-		DDA3937_RS06050	0.17	+0.2
1,362,449	-		DDA3937_RS06050	0.17	-0.6
1,362,454	+		DDA3937_RS06050	0.18	-0.9
1,362,454	+		DDA3937_RS06050	0.18	+0.9
1,362,454	+		DDA3937_RS06050	0.18	-0.4
1,362,455	-		DDA3937_RS06050	0.18	+1.6
1,362,606	-		DDA3937_RS06050	0.28	-0.5
1,362,685	+		DDA3937_RS06050	0.33	-0.8
1,362,686	-		DDA3937_RS06050	0.34	+0.8
1,362,805	+		DDA3937_RS06050	0.42	-0.9
1,362,805	+		DDA3937_RS06050	0.42	-0.1
1,362,805	+		DDA3937_RS06050	0.42	-0.2
1,362,805	+				-0.1
1,362,805	+		DDA3937_RS06050	0.42	-0.4
1,362,805	+		DDA3937_RS06050	0.42	+0.2
1,362,805	+		DDA3937_RS06050	0.42	+0.4
1,362,806	-		DDA3937_RS06050	0.42	-1.1
1,362,806	-		DDA3937_RS06050	0.42	-1.9
1,362,806	-		DDA3937_RS06050	0.42	+0.2