Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,747,631	+		DDA3937_RS20880	0.30	-0.5
4,747,631	+		DDA3937_RS20880	0.30	+1.2
4,747,694	-		DDA3937_RS20880	0.37	-0.3
4,747,694	-		DDA3937_RS20880	0.37	-0.3
4,747,803	+		DDA3937_RS20880	0.50	+0.8
4,747,804	-		DDA3937_RS20880	0.50	-0.7
4,748,124	+		DDA3937_RS20880	0.85	-0.2
4,748,127	+		DDA3937_RS20880	0.86	-0.2
4,748,127	+		DDA3937_RS20880	0.86	-0.2
4,748,128	-		DDA3937_RS20880	0.86	-0.1
4,748,201	+				-1.0
4,748,201	+				+0.1
4,748,201	+				+0.1
4,748,202	-				+0.4
4,748,202	-				-1.5
4,748,202	-				-2.1
4,748,202	-				+0.2
4,748,202	-				-0.8
4,748,202	-				-0.7
4,748,202	-				-0.4
4,748,202	-				+0.1
4,748,202	-				+0.3
4,748,202	-				+0.7
4,748,202	-				-0.4
4,748,273	+				-0.0
4,748,273	+				+0.3
4,748,273	+				-1.1
4,748,273	+				-1.8
4,748,273	+				-2.1
4,748,273	+				+0.3
4,748,274	-				-1.7
4,748,274	-				-0.9
4,748,274	-				-0.8
4,748,274	-				-0.6
4,748,274	-				-0.0
4,748,274	-				+0.2
4,748,274	-				+1.5
4,748,300	+				-0.1
4,748,300	+				-0.2
4,748,382	+				-1.4
4,748,382	+				-0.2
4,748,403	+				+0.9
4,748,523	+				+1.9
4,748,524	-				+0.2
4,748,551	+				-1.2
4,748,551	+				+0.1
4,748,551	+				-0.7
4,748,551	+				-0.1
4,748,559	+				+2.3
4,748,560	-				-1.1
4,748,570	-				+0.7
4,748,593	-				-1.7
4,748,606	+				-1.5
4,748,748	+		DDA3937_RS20885	0.27	-0.5
4,748,748	+		DDA3937_RS20885	0.27	+0.1
4,748,748	+		DDA3937_RS20885	0.27	+0.6
4,748,749	-		DDA3937_RS20885	0.27	-1.0
4,748,759	+		DDA3937_RS20885	0.29	-2.0
4,748,819	+		DDA3937_RS20885	0.41	-2.9
4,748,820	-		DDA3937_RS20885	0.42	-1.4
4,749,158	-				-1.7
4,749,192	+				-0.7
4,749,209	+				-0.0
4,749,293	+				+0.8
4,749,294	-				-0.8
4,749,294	-				-0.0
4,749,294	-				+0.5
4,749,294	-				-2.4
4,749,333	+				-0.3
4,749,414	-		DDA3937_RS20890	0.15	-0.1
4,749,414	-		DDA3937_RS20890	0.15	-1.3
4,749,414	-		DDA3937_RS20890	0.15	+0.0
4,749,414	-		DDA3937_RS20890	0.15	+0.3
4,749,450	-		DDA3937_RS20890	0.18	-1.5
4,749,563	+		DDA3937_RS20890	0.26	+0.1
4,749,564	-		DDA3937_RS20890	0.26	+0.8
4,749,564	-		DDA3937_RS20890	0.26	-0.3
4,749,599	+		DDA3937_RS20890	0.29	-0.3
4,749,599	+		DDA3937_RS20890	0.29	-0.1
4,749,600	-		DDA3937_RS20890	0.29	+0.1
4,749,612	+		DDA3937_RS20890	0.30	-0.0
4,749,613	-		DDA3937_RS20890	0.30	+0.1
4,749,613	-		DDA3937_RS20890	0.30	-1.1
4,749,613	-		DDA3937_RS20890	0.30	-0.2
4,749,613	-		DDA3937_RS20890	0.30	-0.3
4,749,683	+		DDA3937_RS20890	0.35	-0.2
4,749,683	+		DDA3937_RS20890	0.35	-0.1
4,749,683	+		DDA3937_RS20890	0.35	-0.4
4,749,683	+		DDA3937_RS20890	0.35	-2.4
4,749,683	+		DDA3937_RS20890	0.35	-0.3
4,749,684	-		DDA3937_RS20890	0.35	+0.1
4,749,684	-		DDA3937_RS20890	0.35	+0.5
4,749,684	-		DDA3937_RS20890	0.35	-1.3
4,749,684	-		DDA3937_RS20890	0.35	+0.5
4,749,684	-		DDA3937_RS20890	0.35	-0.5
4,749,684	-		DDA3937_RS20890	0.35	+0.6
4,749,712	-		DDA3937_RS20890	0.37	-0.2
4,749,981	+		DDA3937_RS20890	0.57	-1.1
4,749,986	+		DDA3937_RS20890	0.58	-0.1
4,749,987	-				-1.2
4,749,987	-		DDA3937_RS20890	0.58	-0.2
4,749,987	-		DDA3937_RS20890	0.58	+0.3
4,750,097	+		DDA3937_RS20890	0.66	-0.3
4,750,097	+		DDA3937_RS20890	0.66	-0.6