Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,580,528	-				+1.5
4,580,544	-				-0.2
4,580,544	-				-1.3
4,580,625	+				-0.4
4,580,625	+				+0.7
4,580,626	-				-0.6
4,580,626	-				+0.0
4,580,626	-				-0.1
4,580,670	+				-0.2
4,580,670	+				+0.1
4,580,670	+				+0.2
4,580,670	+				+0.5
4,580,670	+				+1.3
4,580,670	+				-0.6
4,580,670	+				-0.4
4,580,671	-				+0.3
4,580,671	-				-0.9
4,580,671	-				-1.2
4,580,671	-				-1.3
4,580,671	-				+0.6
4,580,671	-				-0.5
4,580,671	-				-0.4
4,580,673	+				-0.1
4,580,674	-				-0.7
4,580,674	-				+0.5
4,580,682	+				-1.0
4,580,734	-		DDA3937_RS20110	0.21	-0.3
4,580,774	+		DDA3937_RS20110	0.35	+0.7
4,580,775	-		DDA3937_RS20110	0.36	+1.0
4,580,945	-				-0.6
4,580,949	+				+1.3
4,580,954	-				+0.2
4,580,994	+				-0.9
4,580,994	+				-2.3
4,580,994	+				+0.2
4,580,994	+				-0.1
4,580,994	+				-0.3
4,580,995	-				+0.5
4,580,995	-				+0.9
4,580,995	-				+0.7
4,580,995	-				-0.3
4,580,997	+				-1.0
4,581,047	-				-0.3
4,581,080	+				+0.1
4,581,081	-				+0.3
4,581,403	+		DDA3937_RS20115	0.10	+0.2
4,581,404	-		DDA3937_RS20115	0.10	-0.7
4,581,405	+		DDA3937_RS20115	0.10	-1.2
4,581,405	+		DDA3937_RS20115	0.10	+0.6
4,581,405	+		DDA3937_RS20115	0.10	-0.6
4,581,405	+		DDA3937_RS20115	0.10	+0.6
4,581,406	-		DDA3937_RS20115	0.10	+0.6
4,581,406	-		DDA3937_RS20115	0.10	-1.0
4,581,652	-		DDA3937_RS20115	0.16	-0.6
4,581,652	-		DDA3937_RS20115	0.16	-1.4
4,581,733	+		DDA3937_RS20115	0.18	+0.4
4,581,733	+		DDA3937_RS20115	0.18	-0.6
4,581,747	+		DDA3937_RS20115	0.19	-0.4
4,581,747	+		DDA3937_RS20115	0.19	-2.6
4,581,747	+		DDA3937_RS20115	0.19	+0.6
4,581,748	-		DDA3937_RS20115	0.19	-2.0
4,581,748	-		DDA3937_RS20115	0.19	+0.8
4,581,748	-		DDA3937_RS20115	0.19	+1.9
4,581,748	-		DDA3937_RS20115	0.19	+0.9
4,581,871	+		DDA3937_RS20115	0.22	+0.4
4,581,929	+		DDA3937_RS20115	0.23	-1.5
4,581,930	-		DDA3937_RS20115	0.23	+0.1