Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,993,211	+				-0.2
3,993,212	-				-1.2
3,993,212	-				-1.5
3,993,226	+				+1.0
3,993,226	+				-0.6
3,993,227	-				-0.5
3,993,248	-				+0.5
3,993,295	+				-0.5
3,993,296	-				+1.1
3,993,310	+				+0.1
3,993,339	-		DDA3937_RS17560	0.12	-1.3
3,993,344	+		DDA3937_RS17560	0.13	-0.5
3,993,344	+		DDA3937_RS17560	0.13	-0.6
3,993,344	+		DDA3937_RS17560	0.13	-0.4
3,993,345	-		DDA3937_RS17560	0.13	-0.3
3,993,345	-		DDA3937_RS17560	0.13	-0.2
3,993,345	-		DDA3937_RS17560	0.13	+0.1
3,993,345	-		DDA3937_RS17560	0.13	+0.1
3,993,380	-		DDA3937_RS17560	0.17	-0.8
3,993,380	-		DDA3937_RS17560	0.17	-0.3
3,993,445	+		DDA3937_RS17560	0.24	+0.5
3,993,490	+		DDA3937_RS17560	0.29	+0.6
3,993,491	-		DDA3937_RS17560	0.29	-0.3
3,993,750	+		DDA3937_RS17560	0.56	-0.0
3,993,751	-		DDA3937_RS17560	0.56	-0.1
3,993,751	-		DDA3937_RS17560	0.56	+0.2
3,993,967	+		DDA3937_RS17560	0.79	-1.2
3,994,093	+				+0.0
3,994,133	+				+0.9
3,994,134	-				-0.7
3,994,146	-				+1.2
3,994,308	-		DDA3937_RS17565	0.11	-1.4
3,994,446	-		DDA3937_RS17565	0.22	+0.2
3,994,458	+		DDA3937_RS17565	0.22	-0.5
3,994,508	-		DDA3937_RS17565	0.26	-0.6
3,994,539	-		DDA3937_RS17565	0.29	+0.1
3,994,539	-		DDA3937_RS17565	0.29	+0.8
3,994,579	-		DDA3937_RS17565	0.32	+0.0
3,994,640	+		DDA3937_RS17565	0.36	-0.2
3,994,640	+		DDA3937_RS17565	0.36	-0.0
3,994,641	-		DDA3937_RS17565	0.36	+0.2
3,994,641	-		DDA3937_RS17565	0.36	-1.1
3,994,680	+		DDA3937_RS17565	0.39	+1.2
3,994,680	+		DDA3937_RS17565	0.39	+0.1
3,994,680	+		DDA3937_RS17565	0.39	-0.1
3,994,680	+		DDA3937_RS17565	0.39	+0.0
3,994,681	-		DDA3937_RS17565	0.39	-0.2
3,994,681	-		DDA3937_RS17565	0.39	+0.8
3,994,717	+		DDA3937_RS17565	0.42	-0.4
3,994,718	-		DDA3937_RS17565	0.42	+1.1
3,994,718	-		DDA3937_RS17565	0.42	-0.0
3,994,764	+		DDA3937_RS17565	0.45	+0.2
3,994,764	+		DDA3937_RS17565	0.45	-0.5
3,994,888	-		DDA3937_RS17565	0.55	-0.9
3,994,901	+		DDA3937_RS17565	0.56	-1.0
3,994,901	+		DDA3937_RS17565	0.56	-0.1
3,994,901	+		DDA3937_RS17565	0.56	-0.3
3,994,901	+		DDA3937_RS17565	0.56	-0.5
3,994,902	-		DDA3937_RS17565	0.56	-0.3
3,994,902	-		DDA3937_RS17565	0.56	+0.5
3,994,932	+		DDA3937_RS17565	0.58	+1.4
3,994,932	+		DDA3937_RS17565	0.58	+0.1
3,994,932	+		DDA3937_RS17565	0.58	+1.1
3,994,933	-		DDA3937_RS17565	0.58	+0.6
3,995,173	+		DDA3937_RS17565	0.76	+0.7
3,995,174	-		DDA3937_RS17565	0.76	-0.2
3,995,203	+		DDA3937_RS17565	0.78	-0.7
3,995,331	-		DDA3937_RS17565	0.88	+0.5
3,995,417	-				+0.1
3,995,455	+				+0.2
3,995,457	+				+0.2
3,995,457	+				+0.6
3,995,457	+				-0.5
3,995,458	-				+0.3
3,995,458	-				+0.2
3,995,458	-				-2.4
3,995,458	-				-1.3
3,995,458	-				+0.6
3,995,458	-				-1.5
3,995,467	+				-0.4
3,995,467	+				+0.6
3,995,559	+				-0.2
3,995,559	+				+0.8
3,995,560	-				+1.9
3,995,568	+				+0.3
3,995,757	+				+2.1
3,995,758	-				-0.3
3,995,758	-				+0.5
3,995,758	-				+0.5
3,996,020	+		DDA3937_RS17570	0.16	+0.2
3,996,033	+		DDA3937_RS17570	0.16	+1.4
3,996,117	+		DDA3937_RS17570	0.19	-0.9
3,996,217	+		DDA3937_RS17570	0.22	-1.0
3,996,218	-		DDA3937_RS17570	0.22	-0.3
3,996,257	+		DDA3937_RS17570	0.23	-0.6
3,996,257	+		DDA3937_RS17570	0.23	+0.9
3,996,257	+		DDA3937_RS17570	0.23	-0.3
3,996,257	+		DDA3937_RS17570	0.23	+0.5
3,996,258	-		DDA3937_RS17570	0.23	+0.1
3,996,258	-		DDA3937_RS17570	0.23	+1.1
3,996,449	+		DDA3937_RS17570	0.29	-0.6
3,996,449	+		DDA3937_RS17570	0.29	-0.5
3,996,449	+		DDA3937_RS17570	0.29	-0.3
3,996,450	-		DDA3937_RS17570	0.29	-0.5