Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17245

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,926,393	+		DDA3937_RS17240	0.59	-1.6
3,926,709	-		DDA3937_RS17240	0.76	+1.0
3,926,729	+		DDA3937_RS17240	0.77	-0.4
3,926,771	-		DDA3937_RS17240	0.79	+0.9
3,926,771	-		DDA3937_RS17240	0.79	+0.6
3,926,771	-		DDA3937_RS17240	0.79	+0.1
3,926,953	+		DDA3937_RS17240	0.88	-2.0
3,926,953	+		DDA3937_RS17240	0.88	-2.0
3,926,954	-		DDA3937_RS17240	0.88	+0.4
3,926,954	-		DDA3937_RS17240	0.88	+2.0
3,926,954	-		DDA3937_RS17240	0.88	-1.8
3,926,954	-		DDA3937_RS17240	0.88	-1.6
3,927,240	-				+0.1
3,927,240	-				-0.6
3,927,252	+				-1.4
3,927,275	+				+0.5
3,927,281	-				+0.5
3,927,281	-				+1.4
3,927,281	-				-0.6
3,927,286	+				-0.9
3,927,293	+				+0.2
3,927,317	+				-0.7
3,927,317	+				+1.0
3,927,317	+				-0.4
3,927,317	+				-0.2
3,927,318	-				+1.3
3,927,318	-				+0.4
3,927,318	-				-0.1
3,927,318	-				-1.1
3,927,318	-				+1.0
3,927,318	-				+0.2
3,927,338	-				+0.6
3,927,340	+				+0.3
3,927,340	+				+0.2
3,927,340	+				-0.7
3,927,341	-				+1.0
3,927,380	-		DDA3937_RS17245	0.15	-0.3
3,927,380	-		DDA3937_RS17245	0.15	+0.4
3,927,380	-		DDA3937_RS17245	0.15	-0.2
3,927,404	+		DDA3937_RS17245	0.21	-1.0
3,927,404	+		DDA3937_RS17245	0.21	-0.5
3,927,404	+		DDA3937_RS17245	0.21	-2.0
3,927,404	+		DDA3937_RS17245	0.21	-0.3
3,927,404	+		DDA3937_RS17245	0.21	-0.6
3,927,405	-		DDA3937_RS17245	0.21	-1.4
3,927,405	-		DDA3937_RS17245	0.21	-0.6
3,927,405	-		DDA3937_RS17245	0.21	+0.2
3,927,480	+		DDA3937_RS17245	0.40	+0.4
3,927,480	+		DDA3937_RS17245	0.40	-0.8
3,927,480	+		DDA3937_RS17245	0.40	-0.2
3,927,480	+		DDA3937_RS17245	0.40	-0.9
3,927,481	-		DDA3937_RS17245	0.40	-0.2
3,927,481	-		DDA3937_RS17245	0.40	-1.9
3,927,481	-		DDA3937_RS17245	0.40	-1.4
3,927,481	-		DDA3937_RS17245	0.40	-2.4
3,927,517	+		DDA3937_RS17245	0.49	+0.9
3,927,517	+		DDA3937_RS17245	0.49	-0.1
3,927,518	-		DDA3937_RS17245	0.49	-0.7
3,927,518	-		DDA3937_RS17245	0.49	-1.1
3,927,518	-		DDA3937_RS17245	0.49	-0.5
3,927,518	-		DDA3937_RS17245	0.49	+0.7
3,927,518	-		DDA3937_RS17245	0.49	+1.0
3,927,550	+		DDA3937_RS17245	0.57	-0.7
3,927,550	+		DDA3937_RS17245	0.57	-3.1
3,927,550	+		DDA3937_RS17245	0.57	-0.4
3,927,550	+		DDA3937_RS17245	0.57	-1.1
3,927,551	-		DDA3937_RS17245	0.58	-0.8
3,927,551	-		DDA3937_RS17245	0.58	-0.8
3,927,551	-		DDA3937_RS17245	0.58	-1.2
3,927,582	+		DDA3937_RS17245	0.65	+1.0
3,927,583	-		DDA3937_RS17245	0.65	+0.3
3,927,583	-		DDA3937_RS17245	0.65	-0.2
3,927,583	-		DDA3937_RS17245	0.65	-0.3
3,927,583	-		DDA3937_RS17245	0.65	-0.6
3,927,630	-		DDA3937_RS17245	0.77	-0.3
3,927,630	-		DDA3937_RS17245	0.77	-0.1
3,927,630	-		DDA3937_RS17245	0.77	-0.7
3,927,728	+				+0.9
3,927,764	+		DDA3937_RS17250	0.11	+0.1
3,927,858	+		DDA3937_RS17250	0.45	+0.6
3,927,952	-		DDA3937_RS17250	0.79	-2.6
3,927,952	-		DDA3937_RS17250	0.79	+1.0
3,928,073	+				-1.3
3,928,073	+				+0.9
3,928,073	+				-0.2
3,928,073	+				-1.0
3,928,073	+				+0.6
3,928,074	-				-1.4
3,928,074	-				+0.8
3,928,093	+				-1.3
3,928,113	+				-0.5
3,928,469	+		DDA3937_RS17255	0.49	+0.0
3,928,469	+		DDA3937_RS17255	0.49	+0.0
3,928,475	+		DDA3937_RS17255	0.49	-0.6
3,928,475	+		DDA3937_RS17255	0.49	-1.0
3,928,608	+		DDA3937_RS17255	0.67	-1.6
3,928,608	+		DDA3937_RS17255	0.67	+0.5