Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,716,706	-		DDA3937_RS16305	0.38	+0.6
3,716,732	-		DDA3937_RS16305	0.41	+0.5
3,716,732	-		DDA3937_RS16305	0.41	-0.2
3,716,767	+		DDA3937_RS16305	0.44	+0.7
3,716,768	-		DDA3937_RS16305	0.45	+1.1
3,716,768	-		DDA3937_RS16305	0.45	+0.2
3,716,791	+		DDA3937_RS16305	0.47	-0.1
3,716,791	+		DDA3937_RS16305	0.47	-0.1
3,716,792	-		DDA3937_RS16305	0.47	+0.7
3,716,792	-		DDA3937_RS16305	0.47	+2.3
3,716,792	-		DDA3937_RS16305	0.47	-1.2
3,716,882	-		DDA3937_RS16305	0.56	-0.2
3,716,885	-		DDA3937_RS16305	0.57	-0.1
3,716,978	-		DDA3937_RS16305	0.66	-0.6
3,717,031	+		DDA3937_RS16305	0.72	-0.1
3,717,032	-		DDA3937_RS16305	0.72	+0.2
3,717,064	+		DDA3937_RS16305	0.75	-0.0
3,717,098	-		DDA3937_RS16305	0.79	+0.5
3,717,188	+		DDA3937_RS16305	0.88	-0.3
3,717,189	-		DDA3937_RS16305	0.89	+0.1
3,717,190	+		DDA3937_RS16305	0.89	+1.7
3,717,294	-				-0.4
3,717,415	+				+0.5
3,717,523	+		DDA3937_RS16310	0.10	+0.4
3,717,523	+		DDA3937_RS16310	0.10	+0.3
3,717,524	-		DDA3937_RS16310	0.10	-0.2
3,717,542	+		DDA3937_RS16310	0.12	-1.0
3,717,542	+		DDA3937_RS16310	0.12	+0.3
3,717,542	+		DDA3937_RS16310	0.12	-0.5
3,717,542	+		DDA3937_RS16310	0.12	-0.7
3,717,543	-		DDA3937_RS16310	0.12	-0.5
3,717,543	-		DDA3937_RS16310	0.12	-0.5
3,717,562	+		DDA3937_RS16310	0.13	-0.6
3,717,562	+		DDA3937_RS16310	0.13	+1.0
3,717,563	-		DDA3937_RS16310	0.13	+1.5
3,717,566	+		DDA3937_RS16310	0.13	+0.1
3,717,567	-		DDA3937_RS16310	0.13	+1.0
3,717,567	-		DDA3937_RS16310	0.13	-0.9
3,717,567	-		DDA3937_RS16310	0.13	-0.0
3,717,567	-		DDA3937_RS16310	0.13	+1.2
3,717,567	-				-0.0
3,717,633	+		DDA3937_RS16310	0.18	+0.2
3,717,633	+		DDA3937_RS16310	0.18	+0.3
3,717,633	+		DDA3937_RS16310	0.18	-0.1
3,717,635	+		DDA3937_RS16310	0.18	+0.1
3,717,635	+		DDA3937_RS16310	0.18	+0.3
3,717,635	+		DDA3937_RS16310	0.18	-0.8
3,717,636	-		DDA3937_RS16310	0.18	-2.5
3,717,636	-		DDA3937_RS16310	0.18	+1.2
3,717,636	-		DDA3937_RS16310	0.18	-0.4
3,717,636	-		DDA3937_RS16310	0.18	-1.1
3,717,846	+		DDA3937_RS16310	0.32	-0.0
3,717,846	+		DDA3937_RS16310	0.32	+0.1
3,717,846	+		DDA3937_RS16310	0.32	-1.8
3,717,846	+		DDA3937_RS16310	0.32	+0.9
3,717,847	-		DDA3937_RS16310	0.32	+0.4
3,717,992	+		DDA3937_RS16310	0.42	+0.0
3,717,993	-		DDA3937_RS16310	0.42	+0.4
3,718,080	+		DDA3937_RS16310	0.47	+0.3
3,718,251	+				+0.4
3,718,251	+		DDA3937_RS16310	0.59	+1.0
3,718,252	-		DDA3937_RS16310	0.59	-0.4
3,718,790	-				-0.3
3,718,987	+				+0.1
3,718,988	-		DDA3937_RS16315	0.10	-0.2
3,718,988	-		DDA3937_RS16315	0.10	-0.2
3,718,988	-		DDA3937_RS16315	0.10	-1.6
3,719,032	+		DDA3937_RS16315	0.14	-0.5
3,719,032	+		DDA3937_RS16315	0.14	-0.5
3,719,032	+		DDA3937_RS16315	0.14	-0.3
3,719,033	-		DDA3937_RS16315	0.14	-1.6
3,719,033	-		DDA3937_RS16315	0.14	+1.0
3,719,035	+		DDA3937_RS16315	0.15	+0.2
3,719,035	+		DDA3937_RS16315	0.15	-0.0
3,719,035	+		DDA3937_RS16315	0.15	-0.2
3,719,035	+		DDA3937_RS16315	0.15	+0.7
3,719,208	+		DDA3937_RS16315	0.31	-0.5
3,719,209	-		DDA3937_RS16315	0.31	-0.0
3,719,583	+		DDA3937_RS16315	0.67	-0.3
3,719,583	+		DDA3937_RS16315	0.67	-1.6
3,719,583	+		DDA3937_RS16315	0.67	+0.8
3,719,583	+		DDA3937_RS16315	0.67	-0.5
3,719,583	+		DDA3937_RS16315	0.67	-1.1
3,719,583	+		DDA3937_RS16315	0.67	-0.0
3,719,583	+		DDA3937_RS16315	0.67	-0.2
3,719,583	+		DDA3937_RS16315	0.67	-0.4
3,719,583	+		DDA3937_RS16315	0.67	-0.3
3,719,583	+		DDA3937_RS16315	0.67	-0.2
3,719,583	+		DDA3937_RS16315	0.67	-1.3
3,719,583	+		DDA3937_RS16315	0.67	+0.2
3,719,583	+		DDA3937_RS16315	0.67	+0.8
3,719,583	+		DDA3937_RS16315	0.67	-2.3
3,719,584	-		DDA3937_RS16315	0.67	+0.3
3,719,584	-		DDA3937_RS16315	0.67	-0.6
3,719,584	-				-0.6
3,719,584	-		DDA3937_RS16315	0.67	+0.3
3,719,584	-		DDA3937_RS16315	0.67	+1.0
3,719,584	-		DDA3937_RS16315	0.67	-0.0
3,719,584	-		DDA3937_RS16315	0.67	+0.5
3,719,584	-		DDA3937_RS16315	0.67	+0.3
3,719,585	+		DDA3937_RS16315	0.68	-0.8
3,719,585	+				-0.0
3,719,586	-		DDA3937_RS16315	0.68	+0.2
3,719,789	+		DDA3937_RS16315	0.87	+1.0