Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14610

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,343,792	+		DDA3937_RS14605	0.49	+0.0
3,343,871	+		DDA3937_RS14605	0.55	-1.0
3,343,872	-		DDA3937_RS14605	0.55	-0.2
3,343,922	+		DDA3937_RS14605	0.59	-2.0
3,343,923	-		DDA3937_RS14605	0.59	-2.0
3,343,951	+		DDA3937_RS14605	0.61	-1.8
3,344,175	+		DDA3937_RS14605	0.77	-1.3
3,344,175	+		DDA3937_RS14605	0.77	+0.2
3,344,175	+		DDA3937_RS14605	0.77	-0.2
3,344,175	+		DDA3937_RS14605	0.77	-0.4
3,344,175	+		DDA3937_RS14605	0.77	-0.9
3,344,175	+		DDA3937_RS14605	0.77	+0.4
3,344,175	+		DDA3937_RS14605	0.77	+0.8
3,344,175	+		DDA3937_RS14605	0.77	+0.8
3,344,175	+		DDA3937_RS14605	0.77	+1.1
3,344,175	+		DDA3937_RS14605	0.77	+0.1
3,344,175	+		DDA3937_RS14605	0.77	+0.3
3,344,175	+		DDA3937_RS14605	0.77	-1.2
3,344,175	+		DDA3937_RS14605	0.77	-1.0
3,344,175	+		DDA3937_RS14605	0.77	-0.5
3,344,176	-		DDA3937_RS14605	0.78	-0.9
3,344,176	-		DDA3937_RS14605	0.78	+0.5
3,344,176	-		DDA3937_RS14605	0.78	-0.2
3,344,176	-		DDA3937_RS14605	0.78	-3.2
3,344,176	-		DDA3937_RS14605	0.78	-0.3
3,344,176	-		DDA3937_RS14605	0.78	-0.9
3,344,176	-		DDA3937_RS14605	0.78	-0.4
3,344,176	-		DDA3937_RS14605	0.78	-0.2
3,344,177	+		DDA3937_RS14605	0.78	+0.5
3,344,178	-		DDA3937_RS14605	0.78	+0.5
3,344,178	-		DDA3937_RS14605	0.78	+0.1
3,344,178	-		DDA3937_RS14605	0.78	-0.0
3,344,178	-		DDA3937_RS14605	0.78	-0.3
3,344,352	+				-1.4
3,344,353	-				-0.6
3,344,360	+				-0.3
3,344,360	+				+0.0
3,344,360	+				-0.8
3,344,360	+				-0.8
3,344,360	+				+0.0
3,344,360	+				-0.8
3,344,361	-				-0.7
3,344,361	-				-1.6
3,344,361	-				+0.2
3,344,361	-				+1.0
3,344,533	-				+0.1
3,344,533	-				+0.0
3,344,533	-				+0.3
3,344,537	+				+0.2
3,344,538	-				-0.6
3,344,604	+				-0.1
3,344,635	+				-1.0
3,344,677	+				+0.9
3,344,677	+				-0.8
3,344,678	-				-0.1
3,344,709	+				+2.1
3,344,720	+				-1.7
3,344,720	+				-0.9
3,344,721	-				-1.8
3,344,721	-				-0.5
3,344,721	-				-0.3
3,344,727	-				-0.9
3,344,727	-				+0.6
3,344,727	-				+0.2
3,344,727	-				-0.2
3,344,729	+				-0.4
3,344,730	-				+0.5
3,344,730	-				-0.8
3,344,730	-				-0.6
3,344,736	-				-0.3
3,344,736	-				+0.3
3,344,736	-				+0.6
3,344,738	+				-0.4
3,344,738	+				-0.3
3,344,738	+				+0.6
3,344,739	-				-3.6
3,344,739	-				+0.2
3,344,739	-				-0.3
3,344,744	+				-0.2
3,344,744	+				+1.0
3,344,744	+				+0.4
3,344,744	+				-0.3
3,344,744	+				+0.1
3,344,744	+				-1.2
3,344,745	-				-0.4
3,344,745	-				+0.6
3,344,747	+				+0.6
3,344,747	+				-0.8
3,344,747	+				+0.3
3,344,748	-				+0.2
3,344,748	-				+0.1
3,344,754	-				-0.6
3,344,754	-				-0.2
3,344,754	-				+0.2
3,344,756	+				-1.3
3,344,756	+				+0.8
3,344,756	+				+0.1
3,344,756	+				-0.3
3,344,757	-				+0.8
3,344,757	-				+2.2
3,344,757	-				+0.7
3,344,762	+				+0.4
3,344,763	-				+0.8
3,344,765	+				+0.1
3,344,766	-				+0.6
3,344,768	+				-0.2
3,344,768	+				+0.4
3,344,768	+				+0.3
3,344,768	+				-0.6
3,344,768	+				-0.2
3,344,768	+				-0.2
3,344,768	+				-1.0
3,344,768	+				-0.8
3,344,768	+				-0.3
3,344,768	+				-0.3
3,344,768	+				-0.8
3,344,769	-				-0.7
3,344,769	-				-0.1
3,344,769	-				-2.1
3,344,769	-				+0.1
3,344,769	-				+0.4
3,344,769	-				+0.2
3,344,962	+		DDA3937_RS14610	0.61	-1.0
3,344,977	-		DDA3937_RS14610	0.66	+0.8
3,344,977	-		DDA3937_RS14610	0.66	-0.7
3,344,977	-		DDA3937_RS14610	0.66	-2.5
3,345,052	+				-0.8
3,345,125	+				-0.7
3,345,150	-				-0.6
3,345,167	-				-1.0
3,345,167	-				-1.2
3,345,172	+				+0.3
3,345,173	-				-1.5
3,345,173	-				-1.3
3,345,173	-				-1.6
3,345,173	-				-0.5
3,345,180	-				-0.8
3,345,180	-				-1.3
3,345,180	-				-0.1
3,345,180	-				-0.7
3,345,198	-				-0.7
3,345,253	+				-1.6
3,345,312	+				-0.5
3,345,312	+				+0.1
3,345,313	-				-0.3
3,345,343	+				-1.8
3,345,350	-				+0.0
3,345,350	-				-0.8
3,345,352	-				-1.5
3,345,395	+				-0.8
3,345,396	-				+0.3
3,345,396	-				+0.1
3,345,414	+				+0.6
3,345,414	+				+1.0
3,345,477	+				+0.8
3,345,683	+		DDA3937_RS14615	0.18	-1.8
3,345,683	+		DDA3937_RS14615	0.18	-1.2
3,345,684	-				+0.2
3,345,689	-		DDA3937_RS14615	0.18	+0.2
3,345,749	-		DDA3937_RS14615	0.23	-1.2
3,345,772	+		DDA3937_RS14615	0.25	-0.2
3,345,933	-		DDA3937_RS14615	0.38	+0.6
3,346,060	+				+2.2
3,346,061	-				-0.2