Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,844,724	+				-0.3
2,844,724	+		DDA3937_RS12495	0.36	+0.2
2,844,725	-		DDA3937_RS12495	0.36	+0.5
2,844,851	+		DDA3937_RS12495	0.49	-1.0
2,845,003	+				-1.3
2,845,004	-		DDA3937_RS12495	0.66	-2.1
2,845,051	+		DDA3937_RS12495	0.71	-0.9
2,845,210	-		DDA3937_RS12495	0.89	-0.1
2,845,258	-				-0.0
2,845,407	-				-0.3
2,845,407	-				+0.8
2,845,407	-				+1.7
2,845,479	+				+0.7
2,845,532	+				+0.7
2,845,532	+				-0.7
2,845,532	+				+0.5
2,845,532	+				-0.7
2,845,532	+				-1.1
2,845,533	-				-1.1
2,845,542	-				-0.8
2,846,105	-		DDA3937_RS12500	0.22	-0.9
2,846,160	-		DDA3937_RS12500	0.25	-2.3
2,846,265	+		DDA3937_RS12500	0.30	-1.9
2,846,265	+		DDA3937_RS12500	0.30	-0.9
2,846,994	-				-0.6
2,847,176	+		DDA3937_RS12500	0.74	-1.1
2,847,179	+		DDA3937_RS12500	0.74	+0.0
2,847,714	+				+0.0
2,847,714	+				+0.1
2,847,814	+				+0.4
2,847,814	+				-1.6
2,847,814	+				-0.9
2,847,815	-				-0.9
2,847,867	-				-0.2
2,847,891	-				-0.3
2,847,965	+		DDA3937_RS12505	0.15	-2.5
2,847,965	+		DDA3937_RS12505	0.15	-0.9
2,847,965	+		DDA3937_RS12505	0.15	+0.1
2,847,965	+		DDA3937_RS12505	0.15	+0.1
2,847,966	-		DDA3937_RS12505	0.15	+0.5
2,847,966	-		DDA3937_RS12505	0.15	-1.2
2,847,966	-		DDA3937_RS12505	0.15	-0.0
2,847,966	-		DDA3937_RS12505	0.15	-0.7
2,847,966	-		DDA3937_RS12505	0.15	-0.5
2,848,090	-		DDA3937_RS12505	0.27	+0.3
2,848,115	+				+0.3
2,848,124	+		DDA3937_RS12505	0.31	-0.6
2,848,124	+		DDA3937_RS12505	0.31	-0.5
2,848,124	+		DDA3937_RS12505	0.31	-0.2
2,848,125	-		DDA3937_RS12505	0.31	+0.1
2,848,125	-		DDA3937_RS12505	0.31	-0.5
2,848,125	-		DDA3937_RS12505	0.31	+1.2
2,848,125	-		DDA3937_RS12505	0.31	-0.3
2,848,125	-				+0.7
2,848,149	+		DDA3937_RS12505	0.33	+0.0
2,848,432	+		DDA3937_RS12505	0.61	+0.3
2,848,432	+		DDA3937_RS12505	0.61	-0.6
2,848,432	+		DDA3937_RS12505	0.61	-2.1
2,848,432	+		DDA3937_RS12505	0.61	-0.9
2,848,597	-		DDA3937_RS12505	0.77	-0.7
2,848,614	-		DDA3937_RS12505	0.79	-0.3
2,848,658	+		DDA3937_RS12505	0.83	-0.4
2,848,659	-		DDA3937_RS12505	0.83	+0.5