Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,843,411	+		DDA3937_RS12490	0.54	-0.1
2,843,411	+		DDA3937_RS12490	0.54	-0.3
2,843,411	+		DDA3937_RS12490	0.54	-0.8
2,843,411	+		DDA3937_RS12490	0.54	-1.6
2,843,412	-		DDA3937_RS12490	0.54	-0.5
2,843,412	-		DDA3937_RS12490	0.54	-0.5
2,843,412	-		DDA3937_RS12490	0.54	-0.1
2,843,412	-		DDA3937_RS12490	0.54	+0.5
2,843,412	-		DDA3937_RS12490	0.54	-0.1
2,843,414	+		DDA3937_RS12490	0.54	-0.9
2,843,414	+		DDA3937_RS12490	0.54	+1.1
2,843,567	-		DDA3937_RS12490	0.62	+0.9
2,843,595	+		DDA3937_RS12490	0.64	-0.3
2,843,595	+		DDA3937_RS12490	0.64	-0.1
2,843,595	+		DDA3937_RS12490	0.64	-0.9
2,843,595	+		DDA3937_RS12490	0.64	+0.0
2,843,595	+		DDA3937_RS12490	0.64	+0.2
2,843,595	+		DDA3937_RS12490	0.64	+0.4
2,843,596	-		DDA3937_RS12490	0.64	-0.4
2,843,596	-		DDA3937_RS12490	0.64	-0.6
2,843,596	-		DDA3937_RS12490	0.64	-1.1
2,843,596	-		DDA3937_RS12490	0.64	-0.0
2,843,664	-		DDA3937_RS12490	0.67	-0.5
2,843,664	-		DDA3937_RS12490	0.67	+0.1
2,843,832	+		DDA3937_RS12490	0.76	+0.1
2,843,832	+		DDA3937_RS12490	0.76	+0.1
2,843,832	+		DDA3937_RS12490	0.76	-0.6
2,843,833	-		DDA3937_RS12490	0.76	-0.5
2,843,858	+		DDA3937_RS12490	0.77	+0.1
2,843,858	+		DDA3937_RS12490	0.77	-0.5
2,843,858	+		DDA3937_RS12490	0.77	-0.3
2,843,859	-		DDA3937_RS12490	0.77	-0.6
2,843,862	+		DDA3937_RS12490	0.78	-1.7
2,843,863	-		DDA3937_RS12490	0.78	+0.2
2,843,863	-		DDA3937_RS12490	0.78	-0.7
2,843,903	+		DDA3937_RS12490	0.80	-0.7
2,843,903	+		DDA3937_RS12490	0.80	+0.2
2,843,903	+		DDA3937_RS12490	0.80	-0.1
2,843,903	+		DDA3937_RS12490	0.80	-0.2
2,843,904	-		DDA3937_RS12490	0.80	-0.4
2,844,006	+		DDA3937_RS12490	0.85	-0.3
2,844,006	+		DDA3937_RS12490	0.85	+1.8
2,844,007	-		DDA3937_RS12490	0.85	+0.0
2,844,007	-		DDA3937_RS12490	0.85	-0.9
2,844,007	-		DDA3937_RS12490	0.85	+0.2
2,844,026	+		DDA3937_RS12490	0.86	+0.2
2,844,027	-		DDA3937_RS12490	0.86	+0.4
2,844,027	-		DDA3937_RS12490	0.86	-0.7
2,844,027	-		DDA3937_RS12490	0.86	+0.7
2,844,027	-		DDA3937_RS12490	0.86	-0.5
2,844,062	+		DDA3937_RS12490	0.88	-0.5
2,844,062	+		DDA3937_RS12490	0.88	-0.1
2,844,062	+		DDA3937_RS12490	0.88	+0.4
2,844,122	+				-0.4
2,844,365	-				-0.3
2,844,365	-				-0.3
2,844,365	-				-0.6
2,844,456	+				-0.5
2,844,456	+				-1.9
2,844,456	+				-0.6
2,844,456	+				+0.4
2,844,457	-				-2.1
2,844,457	-				-0.2
2,844,471	+				+0.5
2,844,500	+		DDA3937_RS12495	0.11	+0.3
2,844,501	-		DDA3937_RS12495	0.11	-0.0
2,844,501	-		DDA3937_RS12495	0.11	-0.1
2,844,550	+		DDA3937_RS12495	0.17	-0.4
2,844,724	+				-0.3
2,844,724	+		DDA3937_RS12495	0.36	+0.2
2,844,725	-		DDA3937_RS12495	0.36	+0.5
2,844,851	+		DDA3937_RS12495	0.49	-1.0
2,845,003	+				-1.3
2,845,004	-		DDA3937_RS12495	0.66	-2.1
2,845,051	+		DDA3937_RS12495	0.71	-0.9
2,845,210	-		DDA3937_RS12495	0.89	-0.1
2,845,258	-				-0.0
2,845,407	-				-0.3
2,845,407	-				+0.8
2,845,407	-				+1.7
2,845,479	+				+0.7
2,845,532	+				+0.7
2,845,532	+				-0.7
2,845,532	+				+0.5
2,845,532	+				-0.7
2,845,532	+				-1.1
2,845,533	-				-1.1
2,845,542	-				-0.8
2,846,105	-		DDA3937_RS12500	0.22	-0.9
2,846,160	-		DDA3937_RS12500	0.25	-2.3
2,846,265	+		DDA3937_RS12500	0.30	-1.9
2,846,265	+		DDA3937_RS12500	0.30	-0.9