Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,808,870	+				+0.5
2,808,870	+				-0.1
2,808,870	+				-0.5
2,808,870	+				-1.3
2,808,871	-				-0.2
2,808,871	-				+1.7
2,808,871	-				+1.1
2,808,876	-				+0.7
2,808,876	-				-0.6
2,808,876	-				+1.0
2,808,911	+				-0.2
2,808,916	+				+0.7
2,809,015	-				-0.2
2,809,039	+				+0.1
2,809,039	+				-0.1
2,809,040	-				-0.5
2,809,109	-				+0.8
2,809,127	+				+0.7
2,809,128	-				-1.7
2,809,128	-				-0.0
2,809,128	-				-0.8
2,809,261	+		DDA3937_RS12345	0.28	-0.3
2,809,261	+		DDA3937_RS12345	0.28	+1.2
2,809,367	-		DDA3937_RS12345	0.42	-0.7
2,809,407	-		DDA3937_RS12345	0.48	+0.3
2,809,440	+		DDA3937_RS12345	0.52	+1.3
2,809,441	-		DDA3937_RS12345	0.52	-0.9
2,809,736	+				-0.2
2,809,778	+				-1.1
2,809,818	+				-1.5
2,809,818	+				-1.9
2,809,818	+				-0.2
2,809,819	-				+0.7
2,809,828	+				+0.5
2,809,840	+				+0.9
2,809,840	+				-1.3
2,809,840	+				-1.7
2,809,840	+				-0.3
2,809,840	+				+0.7
2,809,840	+				-0.9
2,809,840	+				+1.3
2,809,840	+				-1.3
2,809,840	+				-0.3
2,809,840	+				-0.2
2,809,840	+				-0.0
2,809,840	+				-0.5
2,809,840	+				-0.3
2,809,841	-				+0.3
2,809,841	-				-0.1
2,809,841	-				+0.7
2,809,841	-				-2.5
2,809,841	-				-0.4
2,809,841	-				-2.3
2,809,841	-				-1.7
2,810,075	+		DDA3937_RS12350	0.46	-1.7
2,810,075	+		DDA3937_RS12350	0.46	-0.9
2,810,076	-		DDA3937_RS12350	0.46	-0.9
2,810,076	-		DDA3937_RS12350	0.46	-0.3
2,810,076	-		DDA3937_RS12350	0.46	+0.3
2,810,076	-		DDA3937_RS12350	0.46	+0.7
2,810,158	+		DDA3937_RS12350	0.62	+0.2
2,810,197	-		DDA3937_RS12350	0.70	-1.2
2,810,197	-		DDA3937_RS12350	0.70	-1.9
2,810,319	+				+1.3
2,810,319	+				-0.3
2,810,320	-				+0.7
2,810,338	+				-0.9
2,810,378	-				+1.7
2,810,378	-				-0.5
2,810,378	-				+0.3
2,810,425	-				-0.6
2,810,693	+		DDA3937_RS12355	0.14	-0.3
2,810,736	+		DDA3937_RS12355	0.17	+0.9
2,810,737	-		DDA3937_RS12355	0.17	-0.3
2,810,737	-		DDA3937_RS12355	0.17	-0.6
2,810,758	+		DDA3937_RS12355	0.18	-0.9
2,810,775	-		DDA3937_RS12355	0.20	+0.7
2,810,775	-		DDA3937_RS12355	0.20	-1.3
2,810,814	+		DDA3937_RS12355	0.22	-0.2
2,810,815	-		DDA3937_RS12355	0.22	-0.8
2,810,815	-		DDA3937_RS12355	0.22	-0.6
2,810,962	+		DDA3937_RS12355	0.33	-1.7
2,810,962	+		DDA3937_RS12355	0.33	-1.9
2,810,962	+		DDA3937_RS12355	0.33	-0.1
2,810,963	-		DDA3937_RS12355	0.33	+0.4
2,810,990	+		DDA3937_RS12355	0.35	-0.3
2,811,034	+		DDA3937_RS12355	0.38	+0.3
2,811,034	+		DDA3937_RS12355	0.38	-1.5
2,811,035	-		DDA3937_RS12355	0.38	+0.5
2,811,035	-		DDA3937_RS12355	0.38	-0.3
2,811,050	+		DDA3937_RS12355	0.39	-0.2
2,811,050	+		DDA3937_RS12355	0.39	-0.7
2,811,050	+		DDA3937_RS12355	0.39	+0.0
2,811,051	-		DDA3937_RS12355	0.39	-0.6
2,811,051	-		DDA3937_RS12355	0.39	-0.1
2,811,299	+		DDA3937_RS12355	0.57	-0.6