Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,791,377	-				+1.1
2,791,377	-				-0.7
2,791,388	-				-0.5
2,791,388	-				-0.7
2,791,388	-				+0.5
2,791,388	-				+0.2
2,791,398	+				-0.7
2,791,407	-				-0.9
2,791,417	+				+0.1
2,791,417	+				-1.1
2,791,417	+				-0.3
2,791,417	+				-1.5
2,791,417	+				-2.9
2,791,417	+				+0.8
2,791,418	-				-1.0
2,791,418	-				-0.7
2,791,418	-				-0.3
2,791,418	-				-0.1
2,791,418	-				+0.2
2,791,418	-				-0.8
2,791,424	+				-0.1
2,791,424	+				-0.0
2,791,435	+				-0.7
2,791,435	+				+1.2
2,791,436	-				+0.3
2,791,436	-				-1.2
2,791,444	-				+0.7
2,791,461	-				-1.5
2,791,461	-				-0.2
2,791,461	-				-0.9
2,791,461	-				+0.8
2,791,461	-				-1.6
2,791,481	+				+0.7
2,791,481	+				-0.2
2,791,483	+				-0.3
2,791,484	-				+0.8
2,791,538	+				-0.3
2,791,562	+				-0.2
2,791,563	-				-0.0
2,791,565	+				+0.3
2,791,565	+				+0.7
2,791,566	-				+2.5
2,791,566	-				-0.6
2,791,566	-				-0.7
2,791,636	+				-0.9
2,791,636	+				-0.3
2,791,637	-				-0.2
2,791,662	+				-0.4
2,791,662	+				-0.3
2,791,663	-				+3.2
2,791,681	+				-0.1
2,791,681	-				+0.7
2,791,940	+		DDA3937_RS12275	0.48	-0.8
2,791,941	-		DDA3937_RS12275	0.48	-0.5
2,791,941	-		DDA3937_RS12275	0.48	+0.5
2,791,941	-		DDA3937_RS12275	0.48	-0.0
2,791,973	+		DDA3937_RS12275	0.53	-0.3
2,791,973	+		DDA3937_RS12275	0.53	-0.7
2,791,973	+		DDA3937_RS12275	0.53	-0.8
2,791,973	+		DDA3937_RS12275	0.53	-1.7
2,791,973	+		DDA3937_RS12275	0.53	-0.3
2,791,973	+		DDA3937_RS12275	0.53	+0.7
2,791,974	-		DDA3937_RS12275	0.53	+0.2
2,792,117	+		DDA3937_RS12275	0.77	-0.6
2,792,117	+		DDA3937_RS12275	0.77	-0.1
2,792,117	+		DDA3937_RS12275	0.77	-0.1
2,792,117	+		DDA3937_RS12275	0.77	+0.8
2,792,118	-		DDA3937_RS12275	0.77	-0.3
2,792,225	-				-2.2
2,792,262	+				+0.4
2,792,492	-		DDA3937_RS12280	0.47	-0.8
2,792,529	+				+1.2
2,792,647	+				-1.7
2,792,647	+				+0.0
2,792,647	+				+0.9
2,792,655	+				-1.7
2,792,655	+				-0.7
2,792,656	-				-0.7
2,792,869	+				-1.4
2,792,870	-				+0.4
2,792,870	-				+1.0
2,792,870	-				+0.1
2,792,871	+				+0.3
2,792,871	+				+0.3
2,792,871	+				+2.6
2,792,871	+				+1.5
2,792,871	+				-0.0
2,792,872	-				-0.1
2,792,872	-				-0.6
2,792,948	+		DDA3937_RS12285	0.11	+0.1
2,792,949	-		DDA3937_RS12285	0.11	+0.8
2,793,032	-		DDA3937_RS12285	0.15	-0.6
2,793,107	+		DDA3937_RS12285	0.17	+0.4
2,793,213	+		DDA3937_RS12285	0.21	+0.9
2,793,214	-		DDA3937_RS12285	0.22	-0.8
2,793,229	-		DDA3937_RS12285	0.22	-0.9
2,793,229	-		DDA3937_RS12285	0.22	-0.6