Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11260

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,557,211	+		DDA3937_RS11255	0.30	-0.0
2,557,211	+		DDA3937_RS11255	0.30	-0.7
2,557,212	-		DDA3937_RS11255	0.30	+0.1
2,557,212	-		DDA3937_RS11255	0.30	-0.8
2,557,215	+		DDA3937_RS11255	0.30	-0.6
2,557,215	+		DDA3937_RS11255	0.30	-1.4
2,557,215	+		DDA3937_RS11255	0.30	-0.4
2,557,215	+		DDA3937_RS11255	0.30	-0.4
2,557,216	-		DDA3937_RS11255	0.30	-1.3
2,557,216	-		DDA3937_RS11255	0.30	+0.5
2,557,280	+		DDA3937_RS11255	0.35	-0.3
2,557,397	+		DDA3937_RS11255	0.43	+1.6
2,557,407	+		DDA3937_RS11255	0.44	+0.3
2,557,428	+		DDA3937_RS11255	0.46	-1.7
2,557,827	-		DDA3937_RS11255	0.75	+0.0
2,557,968	+		DDA3937_RS11255	0.85	-1.0
2,557,968	+		DDA3937_RS11255	0.85	+0.4
2,557,969	-		DDA3937_RS11255	0.85	+1.0
2,557,969	-		DDA3937_RS11255	0.85	+0.4
2,558,152	+				+0.6
2,558,172	+				-0.2
2,558,218	+				-1.1
2,558,218	+				+0.2
2,558,218	+				-1.0
2,558,245	-				-0.0
2,558,261	+		DDA3937_RS11260	0.11	+0.9
2,558,311	-		DDA3937_RS11260	0.19	+0.3
2,558,396	+		DDA3937_RS11260	0.33	+0.6
2,558,396	+		DDA3937_RS11260	0.33	+0.3
2,558,397	-		DDA3937_RS11260	0.33	-0.0
2,558,518	+		DDA3937_RS11260	0.53	-0.8
2,558,519	-		DDA3937_RS11260	0.53	-0.4
2,558,665	+		DDA3937_RS11260	0.76	+0.9
2,558,785	+				-0.5
2,558,786	-				+0.5
2,558,791	+				-0.2
2,558,791	+				-0.7
2,558,791	+				+0.5
2,558,791	+				-0.7
2,558,792	-				-0.7
2,558,792	-				-0.3
2,558,811	+				-1.3
2,558,841	+				+1.0
2,558,859	-				-0.6
2,558,863	+				-1.7
2,558,864	-				+0.6
2,558,900	+				-1.1
2,558,900	+				+0.1
2,558,900	+				-0.6
2,558,900	+				-0.3
2,558,910	+				+0.0
2,558,911	-				+1.8
2,558,925	+				-1.6
2,558,926	-				+1.6
2,558,935	+				-0.1
2,558,936	-				+0.0
2,558,974	+				-0.1
2,558,975	-				+0.3
2,558,984	+				-0.0
2,559,032	+				-1.2
2,559,052	-				-0.2
2,559,052	-				-1.2
2,559,057	+				-1.0
2,559,058	-				-0.4
2,559,058	-				+1.1
2,559,058	-				-1.2
2,559,275	-		DDA3937_RS11265	0.17	-1.2
2,559,275	-		DDA3937_RS11265	0.17	-0.7
2,559,334	-		DDA3937_RS11265	0.21	-1.0
2,559,470	+		DDA3937_RS11265	0.31	-0.1
2,559,471	-		DDA3937_RS11265	0.31	+0.9
2,559,471	-		DDA3937_RS11265	0.31	-1.9
2,559,471	-		DDA3937_RS11265	0.31	+0.0
2,559,471	-		DDA3937_RS11265	0.31	-1.0
2,559,471	-		DDA3937_RS11265	0.31	-0.7
2,559,604	+		DDA3937_RS11265	0.41	+0.7
2,559,605	-		DDA3937_RS11265	0.41	+0.8
2,559,605	-		DDA3937_RS11265	0.41	-0.2
2,559,665	+		DDA3937_RS11265	0.45	-0.3
2,559,665	+		DDA3937_RS11265	0.45	-0.6
2,559,665	+		DDA3937_RS11265	0.45	-1.4
2,559,700	+		DDA3937_RS11265	0.48	-0.1
2,559,701	-		DDA3937_RS11265	0.48	-0.6
2,559,730	-		DDA3937_RS11265	0.50	-0.4