Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10720

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,411,348	+				-0.2
2,411,349	-				-0.7
2,411,349	-				-0.2
2,411,416	+				+2.2
2,411,424	+				+0.5
2,411,436	+				-0.5
2,411,441	+				-0.5
2,411,441	+				-0.2
2,411,442	-				+0.6
2,411,442	-				+0.1
2,411,449	-				+0.2
2,411,507	+				+0.2
2,411,541	-		DDA3937_RS10715	0.14	+1.0
2,411,541	-		DDA3937_RS10715	0.14	-0.8
2,411,550	-		DDA3937_RS10715	0.16	-0.2
2,411,563	-		DDA3937_RS10715	0.19	+0.5
2,411,563	-		DDA3937_RS10715	0.19	-0.8
2,411,563	-		DDA3937_RS10715	0.19	-0.6
2,411,563	-		DDA3937_RS10715	0.19	-0.4
2,411,563	-		DDA3937_RS10715	0.19	-1.2
2,411,572	+		DDA3937_RS10715	0.21	-0.8
2,411,572	+		DDA3937_RS10715	0.21	-0.8
2,411,573	-		DDA3937_RS10715	0.21	-2.4
2,411,573	-		DDA3937_RS10715	0.21	-1.0
2,411,621	+		DDA3937_RS10715	0.31	+0.2
2,411,622	-		DDA3937_RS10715	0.32	-1.5
2,411,639	+		DDA3937_RS10715	0.35	-0.5
2,411,640	-		DDA3937_RS10715	0.36	+0.6
2,411,640	-		DDA3937_RS10715	0.36	-0.3
2,411,640	-		DDA3937_RS10715	0.36	-1.0
2,411,646	+		DDA3937_RS10715	0.37	-0.5
2,411,646	+		DDA3937_RS10715	0.37	+0.4
2,411,717	+		DDA3937_RS10715	0.53	+0.9
2,411,771	+		DDA3937_RS10715	0.64	+2.2
2,411,774	+		DDA3937_RS10715	0.65	-0.5
2,411,775	-		DDA3937_RS10715	0.65	-0.4
2,411,775	-		DDA3937_RS10715	0.65	-1.1
2,411,775	-		DDA3937_RS10715	0.65	-0.5
2,411,795	+		DDA3937_RS10715	0.70	-0.8
2,411,795	+		DDA3937_RS10715	0.70	+0.2
2,411,796	-		DDA3937_RS10715	0.70	-2.0
2,411,796	-		DDA3937_RS10715	0.70	-0.8
2,411,861	-		DDA3937_RS10715	0.84	-0.2
2,411,924	+				-1.6
2,412,017	+				+0.0
2,412,018	-				-0.4
2,412,053	+				-1.2
2,412,054	-				-0.5
2,412,058	-				+0.6
2,412,085	+				-0.4
2,412,085	+				-0.1
2,412,111	-				-0.5
2,412,111	-				-2.4
2,412,183	-				-1.0
2,412,230	-				-0.5
2,412,265	-				-0.1
2,412,311	-				-2.0
2,412,334	+				+0.6
2,412,361	-		DDA3937_RS10720	0.13	+0.0
2,412,727	+		DDA3937_RS10720	0.70	-1.2
2,412,728	-		DDA3937_RS10720	0.70	-0.4
2,412,728	-		DDA3937_RS10720	0.70	-1.1
2,412,728	-		DDA3937_RS10720	0.70	-0.5
2,412,731	+		DDA3937_RS10720	0.71	-1.8
2,412,775	-		DDA3937_RS10720	0.78	-0.3
2,412,781	-		DDA3937_RS10720	0.79	-0.4
2,412,819	+		DDA3937_RS10720	0.84	+1.0
2,412,839	+		DDA3937_RS10720	0.88	-1.7
2,412,860	-				-0.4
2,412,884	-				-1.2
2,412,884	-				-1.5
2,412,969	+				+0.6
2,413,034	-				-0.2
2,413,062	-				-1.2
2,413,073	+				-0.4
2,413,113	+				-0.6
2,413,114	-				-0.4
2,413,115	+				-0.4
2,413,116	-				+0.3
2,413,181	-				-0.3
2,413,208	-				-0.4
2,413,210	-				-1.6
2,413,249	+				-1.4
2,413,269	+				-2.1
2,413,306	-				-0.2
2,413,309	+				-0.1
2,413,344	-				-1.7
2,413,846	-		DDA3937_RS10725	0.55	-1.0
2,413,900	+		DDA3937_RS10725	0.61	-1.5