Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,349,946	+		DDA3937_RS10425	0.84	+0.2
2,350,064	+				-0.3
2,350,064	+				+1.5
2,350,095	-				+1.2
2,350,116	+				-0.5
2,350,117	-				-1.0
2,350,117	-				+1.6
2,350,117	-				-1.0
2,350,131	-				+0.0
2,350,137	+				-1.0
2,350,138	-				-1.3
2,350,138	-				-2.6
2,350,141	+				+1.0
2,350,142	-				-1.7
2,350,142	-				-0.4
2,350,147	+				+0.5
2,350,147	+				-3.2
2,350,147	+				-1.0
2,350,148	-				-1.2
2,350,220	-		DDA3937_RS10430	0.17	+0.5
2,350,220	-		DDA3937_RS10430	0.17	-0.4
2,350,223	+		DDA3937_RS10430	0.18	+0.5
2,350,223	+		DDA3937_RS10430	0.18	-1.0
2,350,223	+		DDA3937_RS10430	0.18	-1.8
2,350,224	-		DDA3937_RS10430	0.18	+0.8
2,350,299	-		DDA3937_RS10430	0.36	-0.7
2,350,548	+				-0.3
2,350,548	+				-2.2
2,350,549	-				-2.0
2,350,549	-				-0.1
2,350,568	+				-0.6
2,350,569	-				-2.0
2,350,569	-				+0.2
2,350,593	+				-0.2
2,350,594	-				-0.1
2,350,594	-				+0.6
2,350,594	-				-1.0
2,350,692	+		DDA3937_RS10435	0.13	-1.3
2,350,693	-		DDA3937_RS10435	0.13	-0.4
2,350,959	-		DDA3937_RS10435	0.60	+2.6
2,351,070	+		DDA3937_RS10435	0.80	-0.1
2,351,198	+				-0.7
2,351,242	+				-0.1
2,351,253	+				-0.4
2,351,287	+				-2.5
2,351,310	+				-2.7
2,351,315	+				-2.1
2,351,350	+				-2.5
2,351,350	+				-0.1
2,351,351	-				-1.0
2,351,360	+				-0.9
2,351,365	+				+0.6
2,351,365	+				-1.1
2,351,394	-				+0.6
2,351,394	-				-0.5
2,351,404	+				-0.8
2,351,404	+				+0.3
2,351,404	+				+0.2
2,351,404	+				-1.3
2,351,405	-				-1.5
2,351,405	-				-0.3
2,351,408	+				-0.6
2,351,408	+				-0.4
2,351,408	+				-0.3
2,351,409	-				+0.6
2,351,409	-				-0.5
2,351,409	-				+0.6
2,351,409	-				+0.4
2,351,409	-				-1.2
2,351,436	+				-1.2
2,351,436	+				+1.0
2,351,439	+				-1.0
2,351,440	-				-0.6
2,351,688	+		DDA3937_RS10440	0.42	+0.6
2,351,693	-		DDA3937_RS10440	0.42	-0.2
2,351,845	+		DDA3937_RS10440	0.63	-0.7
2,351,977	+		DDA3937_RS10440	0.80	-0.7
2,351,977	+		DDA3937_RS10440	0.80	+0.3
2,351,978	-		DDA3937_RS10440	0.80	-0.6
2,351,978	-		DDA3937_RS10440	0.80	-2.0
2,352,003	+		DDA3937_RS10440	0.84	+0.1
2,352,004	-		DDA3937_RS10440	0.84	+0.2
2,352,004	-		DDA3937_RS10440	0.84	-0.4
2,352,101	+				-1.8
2,352,103	+				+0.2
2,352,104	-				+0.0
2,352,104	-				-1.5
2,352,154	-				-0.5
2,352,162	+				-2.4
2,352,163	-				-0.1