Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09230

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,073,698	-		DDA3937_RS09225	0.45	-1.6
2,073,803	-		DDA3937_RS09225	0.53	+0.0
2,073,809	-		DDA3937_RS09225	0.54	+0.3
2,073,827	+		DDA3937_RS09225	0.55	-0.6
2,073,828	-		DDA3937_RS09225	0.55	+0.1
2,073,828	-		DDA3937_RS09225	0.55	-1.3
2,074,024	-		DDA3937_RS09225	0.72	-2.1
2,074,024	-		DDA3937_RS09225	0.72	-0.7
2,074,033	+		DDA3937_RS09225	0.73	+0.4
2,074,041	-		DDA3937_RS09225	0.74	-1.9
2,074,041	-		DDA3937_RS09225	0.74	+0.6
2,074,041	-		DDA3937_RS09225	0.74	-0.1
2,074,044	+		DDA3937_RS09225	0.74	-1.3
2,074,045	-		DDA3937_RS09225	0.74	-1.5
2,074,045	-				-0.3
2,074,058	+		DDA3937_RS09225	0.75	+0.3
2,074,058	+		DDA3937_RS09225	0.75	+0.2
2,074,059	-		DDA3937_RS09225	0.75	-0.9
2,074,134	-		DDA3937_RS09225	0.81	-0.3
2,074,185	-		DDA3937_RS09225	0.86	+0.3
2,074,185	-		DDA3937_RS09225	0.86	-0.6
2,074,210	+		DDA3937_RS09225	0.88	-0.0
2,074,210	+		DDA3937_RS09225	0.88	-1.9
2,074,210	+		DDA3937_RS09225	0.88	+2.7
2,074,210	+		DDA3937_RS09225	0.88	-0.7
2,074,210	+		DDA3937_RS09225	0.88	+1.3
2,074,210	+				-0.7
2,074,211	-		DDA3937_RS09225	0.88	-1.3
2,074,211	-		DDA3937_RS09225	0.88	-0.5
2,074,217	-		DDA3937_RS09225	0.88	+0.8
2,074,405	-				-3.4
2,074,405	-				-1.0
2,074,417	+				-0.0
2,074,470	+				-0.0
2,074,470	+				+0.3
2,074,539	+				+0.1
2,074,540	-				-0.7
2,074,540	-				-0.5
2,074,544	-				-0.0
2,074,560	+				-0.3
2,074,560	+				-0.4
2,074,560	+				+0.7
2,074,561	-				+0.7
2,074,561	-				-0.7
2,074,561	-				-0.1
2,074,561	-				-2.5
2,074,564	+				+0.7
2,074,564	+				-0.7
2,074,564	+				-0.6
2,074,564	+				-1.1
2,074,564	+				+0.1
2,074,564	+				+0.1
2,074,565	-				+0.1
2,074,565	-				-1.2
2,074,565	-				-0.0
2,074,565	-				-1.1
2,074,688	+				+1.2
2,074,689	-				+0.9
2,074,689	-				-0.9
2,074,689	-				-2.1
2,074,689	-				+1.1
2,074,720	+				+0.0
2,074,803	+		DDA3937_RS09230	0.10	+0.7
2,074,803	+		DDA3937_RS09230	0.10	+0.9
2,074,803	+		DDA3937_RS09230	0.10	+2.3
2,074,803	+		DDA3937_RS09230	0.10	+1.4
2,074,804	-		DDA3937_RS09230	0.10	-2.1
2,074,804	-		DDA3937_RS09230	0.10	-1.7
2,074,841	+		DDA3937_RS09230	0.13	+1.2
2,074,841	+				-0.9
2,074,842	-		DDA3937_RS09230	0.13	-0.3
2,074,842	-		DDA3937_RS09230	0.13	+0.2
2,074,842	-		DDA3937_RS09230	0.13	-0.9
2,074,845	+		DDA3937_RS09230	0.14	+0.9
2,074,968	+		DDA3937_RS09230	0.24	+0.1
2,074,968	+		DDA3937_RS09230	0.24	+0.7
2,074,968	+		DDA3937_RS09230	0.24	+0.1
2,074,969	-		DDA3937_RS09230	0.25	-0.9
2,075,142	-		DDA3937_RS09230	0.40	-0.3
2,075,219	+		DDA3937_RS09230	0.46	+0.4
2,075,288	+		DDA3937_RS09230	0.53	+2.0
2,075,380	+		DDA3937_RS09230	0.61	+0.9
2,075,380	+		DDA3937_RS09230	0.61	-0.6
2,075,436	+		DDA3937_RS09230	0.66	+0.3
2,075,437	-		DDA3937_RS09230	0.66	-2.5
2,075,471	+		DDA3937_RS09230	0.69	+2.0
2,075,471	+		DDA3937_RS09230	0.69	+1.2
2,075,471	+		DDA3937_RS09230	0.69	-0.1
2,075,471	+		DDA3937_RS09230	0.69	-0.1
2,075,471	+		DDA3937_RS09230	0.69	-0.3
2,075,865	-				+0.2
2,075,872	-				-0.5
2,075,875	-				-0.6
2,076,163	-		DDA3937_RS09235	0.36	-0.2
2,076,425	-		DDA3937_RS09235	0.64	-1.9
2,076,577	-		DDA3937_RS09235	0.80	-0.9
2,076,577	-		DDA3937_RS09235	0.80	-1.4
2,076,618	+		DDA3937_RS09235	0.84	-0.9
2,076,618	+		DDA3937_RS09235	0.84	+2.0
2,076,696	+				-0.8
2,076,696	+				+1.7
2,076,697	-				-0.1
2,076,697	-				+0.2
2,076,775	-				+0.3
2,076,796	+				-0.4
2,076,796	+				+0.1
2,076,796	+				-0.3
2,076,803	+				-0.1
2,076,803	+				-0.3