Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,006,059	-				-0.5
2,006,059	-				-1.0
2,006,066	+				-0.9
2,006,066	+				-0.5
2,006,068	+				+0.4
2,006,069	-				+0.6
2,006,069	-				-0.4
2,006,177	-				-0.6
2,006,177	-				-0.6
2,006,177	-				-0.3
2,006,225	-		DDA3937_RS08880	0.15	-1.5
2,006,225	-		DDA3937_RS08880	0.15	-0.0
2,006,281	-		DDA3937_RS08880	0.26	-0.5
2,006,281	-		DDA3937_RS08880	0.26	-0.4
2,006,363	+		DDA3937_RS08880	0.43	-0.3
2,006,363	+		DDA3937_RS08880	0.43	-0.1
2,006,399	+		DDA3937_RS08880	0.50	-0.4
2,006,400	-		DDA3937_RS08880	0.50	-1.3
2,006,481	+		DDA3937_RS08880	0.67	-0.7
2,006,481	+		DDA3937_RS08880	0.67	-0.5
2,006,481	+		DDA3937_RS08880	0.67	+0.3
2,006,481	+		DDA3937_RS08880	0.67	+1.1
2,006,482	-		DDA3937_RS08880	0.67	-0.3
2,006,482	-		DDA3937_RS08880	0.67	-1.0
2,006,482	-		DDA3937_RS08880	0.67	-1.3
2,006,482	-		DDA3937_RS08880	0.67	+1.0
2,006,501	+		DDA3937_RS08880	0.71	+1.2
2,006,641	-				-2.5
2,006,656	-				-1.2
2,006,725	+				-0.0
2,006,761	+				+0.5
2,006,762	-				-0.2
2,006,794	+				+0.0
2,006,795	-				-0.7
2,006,795	-				-0.1
2,006,855	-				-0.9
2,007,001	+				-0.6
2,007,022	+				-0.7
2,007,023	-				+0.1
2,007,148	-		DDA3937_RS08885	0.36	-1.3
2,007,241	-		DDA3937_RS08885	0.61	-0.9
2,007,281	+		DDA3937_RS08885	0.71	-0.6
2,007,296	-		DDA3937_RS08885	0.75	-1.5
2,007,296	-		DDA3937_RS08885	0.75	+0.3
2,007,329	+		DDA3937_RS08885	0.84	+0.3
2,007,330	-		DDA3937_RS08885	0.84	-2.1
2,007,364	+				+0.5
2,007,369	-				-0.9
2,007,544	-		DDA3937_RS23130	0.15	-0.3
2,007,593	-		DDA3937_RS23130	0.27	+0.7
2,007,761	-		DDA3937_RS23130	0.68	-1.3
2,007,868	-				-0.3
2,007,930	-				+1.0
2,007,977	+				+0.9
2,008,065	+				-0.3
2,008,069	-				-0.9
2,008,069	-				-0.8
2,008,125	-				-0.6
2,008,147	-				-1.5
2,008,379	+		DDA3937_RS08890	0.48	+0.7
2,008,379	+		DDA3937_RS08890	0.48	+0.0