Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,944,942	-		DDA3937_RS08615	0.25	-0.3
1,944,942	-		DDA3937_RS08615	0.25	+0.1
1,944,992	+		DDA3937_RS08615	0.29	-0.9
1,944,992	+		DDA3937_RS08615	0.29	-0.6
1,944,992	+		DDA3937_RS08615	0.29	-0.1
1,944,992	+		DDA3937_RS08615	0.29	-1.0
1,944,992	+		DDA3937_RS08615	0.29	-0.6
1,944,993	-		DDA3937_RS08615	0.30	+0.4
1,944,993	-		DDA3937_RS08615	0.30	-0.4
1,944,993	-		DDA3937_RS08615	0.30	+0.1
1,944,993	-		DDA3937_RS08615	0.30	+0.8
1,944,996	+		DDA3937_RS08615	0.30	-0.3
1,944,997	-		DDA3937_RS08615	0.30	-0.3
1,945,042	+		DDA3937_RS08615	0.34	-0.2
1,945,043	-		DDA3937_RS08615	0.34	-0.2
1,945,043	-		DDA3937_RS08615	0.34	-0.1
1,945,151	+		DDA3937_RS08615	0.43	-2.4
1,945,202	+		DDA3937_RS08615	0.47	-0.0
1,945,202	+		DDA3937_RS08615	0.47	-0.1
1,945,203	-		DDA3937_RS08615	0.47	-0.6
1,945,361	+		DDA3937_RS08615	0.60	-1.7
1,945,361	+		DDA3937_RS08615	0.60	+0.5
1,945,362	-		DDA3937_RS08615	0.60	-1.1
1,945,362	-		DDA3937_RS08615	0.60	+2.4
1,945,362	-		DDA3937_RS08615	0.60	-0.9
1,945,400	+		DDA3937_RS08615	0.63	+0.6
1,945,401	-		DDA3937_RS08615	0.63	-1.3
1,945,449	-		DDA3937_RS08615	0.67	-2.9
1,945,462	+		DDA3937_RS08615	0.68	-0.4
1,945,483	+		DDA3937_RS08615	0.70	-0.3
1,945,483	+		DDA3937_RS08615	0.70	-0.5
1,945,574	-		DDA3937_RS08615	0.78	+0.6
1,945,722	+				-2.7
1,945,722	+				-1.9
1,945,722	+				-1.9
1,945,723	-				-0.4
1,945,895	+				-0.1
1,945,939	+		DDA3937_RS08620	0.13	-0.4
1,945,939	+		DDA3937_RS08620	0.13	-0.1
1,945,940	-		DDA3937_RS08620	0.13	+0.0
1,945,940	-		DDA3937_RS08620	0.13	+0.2
1,945,940	-		DDA3937_RS08620	0.13	+0.1
1,946,013	+		DDA3937_RS08620	0.23	-0.6
1,946,013	+		DDA3937_RS08620	0.23	-0.4
1,946,014	-		DDA3937_RS08620	0.23	-0.1
1,946,133	+		DDA3937_RS08620	0.38	-0.3
1,946,134	-		DDA3937_RS08620	0.38	+2.5
1,946,134	-				-0.0
1,946,134	-		DDA3937_RS08620	0.38	-0.5
1,946,134	-		DDA3937_RS08620	0.38	+0.6
1,946,187	+		DDA3937_RS08620	0.45	+0.4
1,946,187	+		DDA3937_RS08620	0.45	+0.3
1,946,187	+		DDA3937_RS08620	0.45	+0.1
1,946,188	-		DDA3937_RS08620	0.45	-0.4
1,946,188	-				+0.7
1,946,188	-		DDA3937_RS08620	0.45	+0.7
1,946,188	-		DDA3937_RS08620	0.45	-0.0
1,946,188	-		DDA3937_RS08620	0.45	-1.3
1,946,188	-		DDA3937_RS08620	0.45	-0.7
1,946,188	-		DDA3937_RS08620	0.45	-0.3
1,946,266	-		DDA3937_RS08620	0.55	+1.3
1,946,308	-		DDA3937_RS08620	0.61	+1.4
1,946,353	+		DDA3937_RS08620	0.67	+0.8
1,946,353	+		DDA3937_RS08620	0.67	-0.7
1,946,353	+		DDA3937_RS08620	0.67	-1.2
1,946,517	-		DDA3937_RS08620	0.88	+0.2
1,946,631	-				+1.4
1,946,647	+				+0.5
1,946,647	+				+0.0
1,946,648	-				+0.4
1,946,704	-				+0.9
1,946,731	-				-2.1
1,946,814	+		DDA3937_RS08625	0.10	+0.1
1,946,814	+		DDA3937_RS08625	0.10	-0.3
1,946,815	-		DDA3937_RS08625	0.10	+0.7
1,946,815	-		DDA3937_RS08625	0.10	+0.3
1,946,816	+		DDA3937_RS08625	0.10	+0.6
1,946,816	+		DDA3937_RS08625	0.10	+2.0
1,946,816	+		DDA3937_RS08625	0.10	+0.4
1,946,816	+		DDA3937_RS08625	0.10	+0.3
1,946,816	+		DDA3937_RS08625	0.10	+0.0
1,946,816	+		DDA3937_RS08625	0.10	-0.9
1,946,817	-		DDA3937_RS08625	0.10	-1.9
1,946,817	-		DDA3937_RS08625	0.10	+0.8
1,946,817	-		DDA3937_RS08625	0.10	-1.0
1,946,817	-		DDA3937_RS08625	0.10	-1.7
1,946,817	-		DDA3937_RS08625	0.10	+0.6
1,946,817	-		DDA3937_RS08625	0.10	+0.2
1,946,817	-		DDA3937_RS08625	0.10	+0.3
1,946,817	-		DDA3937_RS08625	0.10	+0.5
1,946,817	-		DDA3937_RS08625	0.10	+0.5
1,946,817	-		DDA3937_RS08625	0.10	-0.3
1,946,817	-		DDA3937_RS08625	0.10	+1.5
1,946,817	-		DDA3937_RS08625	0.10	+0.1
1,946,830	+		DDA3937_RS08625	0.12	-0.1
1,946,854	+		DDA3937_RS08625	0.14	-1.8
1,946,887	+		DDA3937_RS08625	0.17	-1.3
1,946,888	-		DDA3937_RS08625	0.17	+0.7
1,946,888	-		DDA3937_RS08625	0.17	-0.7
1,946,888	-		DDA3937_RS08625	0.17	-0.6
1,946,888	-		DDA3937_RS08625	0.17	-1.3
1,946,888	-		DDA3937_RS08625	0.17	+0.5
1,946,907	+		DDA3937_RS08625	0.19	-0.9
1,946,907	+		DDA3937_RS08625	0.19	+0.7
1,946,907	+		DDA3937_RS08625	0.19	-0.2
1,946,908	-		DDA3937_RS08625	0.19	+0.3
1,946,908	-				+2.3
1,947,298	-		DDA3937_RS08625	0.54	-0.4
1,947,316	-		DDA3937_RS08625	0.55	+0.0
1,947,381	+		DDA3937_RS08625	0.61	-2.1
1,947,389	+		DDA3937_RS08625	0.62	+0.2
1,947,405	+		DDA3937_RS08625	0.64	+0.6
1,947,512	+		DDA3937_RS08625	0.73	+0.1
1,947,512	+		DDA3937_RS08625	0.73	+0.6
1,947,565	+		DDA3937_RS08625	0.78	-0.6