Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,921,741	+				-0.9
1,921,742	-				-0.6
1,921,843	+				-1.3
1,921,844	-				-0.6
1,921,844	-				-2.1
1,921,915	-				-1.3
1,921,915	-				-0.2
1,921,915	-				+0.3
1,921,915	-				-0.1
1,921,919	-				+0.5
1,921,919	-				-0.3
1,921,919	-				-0.2
1,921,919	-				+0.4
1,921,919	-				-0.3
1,921,919	-				-0.8
1,921,919	-				+0.1
1,921,919	-				-1.1
1,921,919	-				+0.5
1,921,919	-				-0.3
1,921,919	-				+0.2
1,921,919	-				-0.0
1,921,919	-				-0.4
1,921,919	-				-0.0
1,921,919	-				-1.3
1,921,919	-				-0.4
1,921,919	-				-0.9
1,921,919	-				-1.5
1,921,919	-				-0.0
1,921,919	-				-1.5
1,921,919	-				-0.3
1,921,919	-				-1.3
1,921,919	-				-0.4
1,921,919	-				-0.1
1,921,919	-				-0.6
1,921,919	-				-0.6
1,921,919	-				-3.4
1,921,919	-				+0.8
1,921,919	-				-0.1
1,921,919	-				+1.5
1,921,919	-				-0.5
1,921,919	-				-0.3
1,921,919	-				+0.6
1,921,919	-				-0.7
1,921,921	-				-1.1
1,921,921	-				+0.4
1,921,921	-				-0.2
1,921,923	-				+0.7
1,921,923	-				+0.0
1,921,923	-				-1.7
1,921,923	-				-0.4
1,921,923	-				-1.6
1,921,923	-				+0.5
1,921,932	-				-0.8
1,922,387	+				+1.0
1,922,388	-				+0.6
1,922,418	+				-1.4
1,922,418	+				-0.1
1,922,471	+				-0.2
1,922,526	+				-0.2
1,922,543	+				+0.0
1,922,544	-				-1.2
1,922,558	-				+0.1
1,922,590	+				-0.3
1,922,647	+				-0.0
1,922,647	+				+0.1
1,922,648	-				+0.1
1,922,678	+				+1.0
1,922,731	+				-0.3
1,922,731	+				-0.6
1,922,732	-				+0.4
1,922,732	-				+0.4
1,922,732	-				-0.7
1,922,836	-		DDA3937_RS08505	0.12	+1.2
1,922,840	-		DDA3937_RS08505	0.13	+1.2
1,923,030	+		DDA3937_RS08505	0.27	+0.4
1,923,176	+		DDA3937_RS08505	0.39	+0.1
1,923,248	+		DDA3937_RS08505	0.44	+0.7
1,923,282	-		DDA3937_RS08505	0.47	-1.3
1,923,293	+				-1.6
1,923,293	+		DDA3937_RS08505	0.48	+0.0
1,923,293	+		DDA3937_RS08505	0.48	-0.3
1,923,294	-		DDA3937_RS08505	0.48	+0.3
1,923,458	+		DDA3937_RS08505	0.61	+0.9
1,923,459	-		DDA3937_RS08505	0.61	-0.4
1,923,467	+		DDA3937_RS08505	0.62	-1.1
1,923,584	+		DDA3937_RS08505	0.71	-0.2
1,923,783	+		DDA3937_RS08505	0.86	-0.6
1,923,785	+		DDA3937_RS08505	0.86	+0.1
1,923,850	+				+0.1
1,923,851	-				-0.5
1,923,925	-				-1.0
1,923,998	-				+0.1
1,924,007	+				+1.3
1,924,007	+				+1.1
1,924,007	+				-0.6
1,924,007	+				-0.2
1,924,007	+				+0.6
1,924,007	+				-0.6
1,924,008	-				+0.9
1,924,008	-				+0.4
1,924,008	-				+0.4
1,924,008	-				-0.7
1,924,008	-				-1.4
1,924,008	-				-0.3
1,924,062	-				-0.5
1,924,184	+		DDA3937_RS08510	0.13	-0.4
1,924,222	+		DDA3937_RS08510	0.17	+1.5
1,924,223	-		DDA3937_RS08510	0.17	-0.8
1,924,312	-		DDA3937_RS08510	0.25	-0.3
1,924,312	-		DDA3937_RS08510	0.25	-0.8
1,924,448	+		DDA3937_RS08510	0.39	-2.4
1,924,448	+		DDA3937_RS08510	0.39	-0.5
1,924,448	+		DDA3937_RS08510	0.39	+1.2
1,924,448	+		DDA3937_RS08510	0.39	-0.1
1,924,448	+		DDA3937_RS08510	0.39	+2.1
1,924,449	-		DDA3937_RS08510	0.39	+1.0
1,924,529	-		DDA3937_RS08510	0.46	+0.4
1,924,536	+		DDA3937_RS08510	0.47	+0.4
1,924,536	+		DDA3937_RS08510	0.47	-0.1
1,924,536	+		DDA3937_RS08510	0.47	-3.1
1,924,537	-		DDA3937_RS08510	0.47	-0.3
1,924,551	+		DDA3937_RS08510	0.48	+0.2
1,924,551	+		DDA3937_RS08510	0.48	-0.9
1,924,551	+		DDA3937_RS08510	0.48	-0.6
1,924,555	+		DDA3937_RS08510	0.49	-1.2
1,924,555	+		DDA3937_RS08510	0.49	-0.2
1,924,556	-		DDA3937_RS08510	0.49	-0.8
1,924,556	-		DDA3937_RS08510	0.49	-0.4
1,924,556	-		DDA3937_RS08510	0.49	-0.2
1,924,572	+		DDA3937_RS08510	0.50	+0.0
1,924,573	-		DDA3937_RS08510	0.51	-0.1
1,924,573	-		DDA3937_RS08510	0.51	+0.2
1,924,586	+		DDA3937_RS08510	0.52	-0.0
1,924,783	-		DDA3937_RS08510	0.71	+0.5
1,924,819	+		DDA3937_RS08510	0.74	+0.4
1,924,820	-		DDA3937_RS08510	0.74	-0.4
1,924,820	-		DDA3937_RS08510	0.74	-0.5
1,924,924	-		DDA3937_RS08510	0.84	-0.0
1,924,959	-		DDA3937_RS08510	0.88	-1.3