Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08155

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,845,712	-		DDA3937_RS08145	0.88	-0.5
1,845,774	+				+3.1
1,845,774	+				+1.1
1,845,774	+				+0.7
1,845,774	+				-0.6
1,845,774	+				-0.9
1,845,774	+				-0.4
1,845,774	+				-0.3
1,845,774	+				-0.3
1,845,774	+				-0.1
1,845,774	+				+0.2
1,845,774	+				-2.4
1,845,774	+				+1.1
1,845,774	+				-1.8
1,845,774	+				-2.1
1,845,774	+				+1.1
1,845,775	-				+0.1
1,845,775	-				+0.7
1,845,775	-				-0.8
1,845,775	-				-0.1
1,845,775	-				-0.9
1,845,775	-				-0.5
1,845,775	-				-0.3
1,846,167	+		DDA3937_RS08150	0.40	+0.2
1,846,167	+		DDA3937_RS08150	0.40	-1.0
1,846,168	-		DDA3937_RS08150	0.41	-0.6
1,846,425	+		DDA3937_RS08150	0.69	-0.7
1,846,425	+		DDA3937_RS08150	0.69	-0.0
1,846,425	+		DDA3937_RS08150	0.69	-1.6
1,846,426	-		DDA3937_RS08150	0.69	-0.6
1,846,426	-		DDA3937_RS08150	0.69	-1.6
1,846,426	-		DDA3937_RS08150	0.69	-0.1
1,846,447	+		DDA3937_RS08150	0.72	-1.3
1,846,447	+		DDA3937_RS08150	0.72	+0.6
1,846,447	+		DDA3937_RS08150	0.72	-1.7
1,846,447	+		DDA3937_RS08150	0.72	+1.1
1,846,447	+		DDA3937_RS08150	0.72	-0.0
1,846,448	-		DDA3937_RS08150	0.72	+1.6
1,846,448	-		DDA3937_RS08150	0.72	-0.6
1,846,448	-		DDA3937_RS08150	0.72	-1.1
1,846,448	-		DDA3937_RS08150	0.72	+0.3
1,846,532	+		DDA3937_RS08150	0.81	-0.7
1,846,645	+				-0.9
1,846,645	+				-0.6
1,846,646	-				+0.7
1,846,646	-				-0.6
1,846,646	-				+0.6
1,846,646	-				+1.7
1,846,739	+				-0.0
1,846,740	-				+1.7
1,846,794	+		DDA3937_RS08155	0.11	-1.3
1,846,794	+		DDA3937_RS08155	0.11	-0.3
1,846,795	-		DDA3937_RS08155	0.11	+0.3
1,846,910	-		DDA3937_RS08155	0.23	+1.7
1,846,910	-		DDA3937_RS08155	0.23	-1.6
1,846,965	+		DDA3937_RS08155	0.29	-0.2
1,846,965	+		DDA3937_RS08155	0.29	-0.2
1,846,965	+		DDA3937_RS08155	0.29	+0.7
1,846,966	-		DDA3937_RS08155	0.30	-0.9
1,846,966	-		DDA3937_RS08155	0.30	-1.3
1,846,966	-		DDA3937_RS08155	0.30	+0.7
1,846,966	-		DDA3937_RS08155	0.30	+0.3
1,846,998	+		DDA3937_RS08155	0.33	-2.1
1,846,998	+		DDA3937_RS08155	0.33	+0.5
1,846,998	+		DDA3937_RS08155	0.33	-0.2
1,846,998	+		DDA3937_RS08155	0.33	-0.3
1,846,999	-		DDA3937_RS08155	0.33	-1.3
1,846,999	-		DDA3937_RS08155	0.33	-1.6
1,847,047	+		DDA3937_RS08155	0.39	-2.9
1,847,047	+		DDA3937_RS08155	0.39	+0.7
1,847,051	-		DDA3937_RS08155	0.39	-1.2
1,847,086	+		DDA3937_RS08155	0.43	-2.1
1,847,100	+		DDA3937_RS08155	0.44	-0.0
1,847,119	+		DDA3937_RS08155	0.46	-0.1
1,847,122	-		DDA3937_RS08155	0.47	-0.8
1,847,122	-		DDA3937_RS08155	0.47	-0.3
1,847,174	+		DDA3937_RS08155	0.52	+0.5
1,847,177	-		DDA3937_RS08155	0.53	-0.0
1,847,178	+		DDA3937_RS08155	0.53	-0.3
1,847,179	-		DDA3937_RS08155	0.53	-1.3
1,847,232	+		DDA3937_RS08155	0.59	-1.1
1,847,233	-		DDA3937_RS08155	0.59	-1.6
1,847,400	+		DDA3937_RS08155	0.77	-1.3
1,847,400	+		DDA3937_RS08155	0.77	+0.2
1,847,400	+				-0.3
1,847,401	-		DDA3937_RS08155	0.77	-1.9
1,847,488	+		DDA3937_RS08155	0.87	-1.4
1,847,642	-				+0.6
1,847,647	+				+1.3
1,847,647	+				-0.0
1,847,648	-				-0.1
1,847,648	-				-1.4
1,847,648	-				-1.9
1,847,648	-				-0.2
1,847,648	-				+0.7
1,847,648	-				+0.7
1,847,648	-				-0.2
1,847,648	-				+0.1
1,847,648	-				+1.0
1,847,648	-				-1.4
1,847,712	+				-2.9
1,847,712	+				-1.0
1,847,712	+				-0.3
1,847,713	-				-0.9
1,847,718	+				-1.3
1,847,769	-				-0.6
1,847,844	-				-0.3
1,847,844	-				-0.3
1,847,844	-				+0.4
1,847,886	-				-0.0
1,847,887	+				-2.3
1,847,887	+				+0.3
1,847,887	+				-1.0
1,847,894	+				-0.3
1,847,895	-				+0.4
1,847,895	-				-1.7
1,847,947	-				+0.1
1,847,947	-				+0.3
1,847,979	+		DDA3937_RS08160	0.10	-1.2
1,847,980	-		DDA3937_RS08160	0.10	-0.6
1,847,980	-		DDA3937_RS08160	0.10	-0.3
1,847,980	-		DDA3937_RS08160	0.10	-0.4
1,847,980	-		DDA3937_RS08160	0.10	+0.4
1,847,980	-		DDA3937_RS08160	0.10	+0.3
1,847,999	+		DDA3937_RS08160	0.12	+0.1
1,848,116	+		DDA3937_RS08160	0.25	-1.3
1,848,116	+		DDA3937_RS08160	0.25	-1.3
1,848,117	-		DDA3937_RS08160	0.25	-0.7
1,848,117	-		DDA3937_RS08160	0.25	-1.2
1,848,117	-		DDA3937_RS08160	0.25	-0.4
1,848,117	-		DDA3937_RS08160	0.25	-1.9
1,848,117	-		DDA3937_RS08160	0.25	+0.5
1,848,117	-		DDA3937_RS08160	0.25	-0.5
1,848,155	+		DDA3937_RS08160	0.29	+1.4
1,848,155	+		DDA3937_RS08160	0.29	-1.5
1,848,160	+		DDA3937_RS08160	0.30	-1.5
1,848,184	-		DDA3937_RS08160	0.33	+0.0
1,848,213	-		DDA3937_RS08160	0.36	+0.4
1,848,228	+		DDA3937_RS08160	0.37	+0.4
1,848,265	-		DDA3937_RS08160	0.41	-1.7
1,848,267	+		DDA3937_RS08160	0.42	-0.5
1,848,267	+		DDA3937_RS08160	0.42	-0.3
1,848,269	+				-0.3
1,848,324	-		DDA3937_RS08160	0.48	-1.3
1,848,341	-		DDA3937_RS08160	0.50	+0.1
1,848,342	+		DDA3937_RS08160	0.50	-0.0
1,848,342	+		DDA3937_RS08160	0.50	+0.4
1,848,360	+		DDA3937_RS08160	0.52	-1.4
1,848,494	-		DDA3937_RS08160	0.66	+0.0
1,848,582	-		DDA3937_RS08160	0.76	-0.4
1,848,582	-		DDA3937_RS08160	0.76	-0.6