Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08145

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,843,980	-				-2.0
1,843,996	+				-2.1
1,844,093	+				-0.3
1,844,417	+		DDA3937_RS08140	0.35	-0.5
1,844,417	+		DDA3937_RS08140	0.35	+0.3
1,844,417	+		DDA3937_RS08140	0.35	-2.4
1,844,417	+		DDA3937_RS08140	0.35	-0.1
1,844,418	-		DDA3937_RS08140	0.35	+1.3
1,844,418	-		DDA3937_RS08140	0.35	-0.0
1,844,418	-		DDA3937_RS08140	0.35	-0.8
1,844,474	+		DDA3937_RS08140	0.42	-2.1
1,844,475	-				-0.3
1,844,530	+		DDA3937_RS08140	0.49	-0.0
1,844,673	+		DDA3937_RS08140	0.66	+1.4
1,844,674	-		DDA3937_RS08140	0.66	+0.4
1,844,674	-		DDA3937_RS08140	0.66	+0.7
1,844,847	+		DDA3937_RS08140	0.87	-0.9
1,844,847	+		DDA3937_RS08140	0.87	+0.4
1,844,848	-		DDA3937_RS08140	0.87	-0.6
1,844,848	-		DDA3937_RS08140	0.87	-0.3
1,844,956	-				-1.2
1,844,958	+				-1.5
1,844,958	+				+0.1
1,844,959	-				-0.0
1,844,959	-				-1.6
1,844,959	-				-1.9
1,844,959	-				-1.9
1,844,959	-				-1.3
1,845,227	+		DDA3937_RS08145	0.32	-0.5
1,845,358	+				+0.7
1,845,359	-		DDA3937_RS08145	0.47	-1.0
1,845,433	+		DDA3937_RS08145	0.56	+0.7
1,845,434	-		DDA3937_RS08145	0.56	-2.3
1,845,434	-		DDA3937_RS08145	0.56	-0.5
1,845,445	+		DDA3937_RS08145	0.57	+0.7
1,845,446	-		DDA3937_RS08145	0.57	-0.9
1,845,521	-		DDA3937_RS08145	0.66	+1.7
1,845,521	-		DDA3937_RS08145	0.66	-1.0
1,845,712	-		DDA3937_RS08145	0.88	-0.5
1,845,774	+				+3.1
1,845,774	+				+1.1
1,845,774	+				+0.7
1,845,774	+				-0.6
1,845,774	+				-0.9
1,845,774	+				-0.4
1,845,774	+				-0.3
1,845,774	+				-0.3
1,845,774	+				-0.1
1,845,774	+				+0.2
1,845,774	+				-2.4
1,845,774	+				+1.1
1,845,774	+				-1.8
1,845,774	+				-2.1
1,845,774	+				+1.1
1,845,775	-				+0.1
1,845,775	-				+0.7
1,845,775	-				-0.8
1,845,775	-				-0.1
1,845,775	-				-0.9
1,845,775	-				-0.5
1,845,775	-				-0.3
1,846,167	+		DDA3937_RS08150	0.40	+0.2
1,846,167	+		DDA3937_RS08150	0.40	-1.0
1,846,168	-		DDA3937_RS08150	0.41	-0.6
1,846,425	+		DDA3937_RS08150	0.69	-0.7
1,846,425	+		DDA3937_RS08150	0.69	-0.0
1,846,425	+		DDA3937_RS08150	0.69	-1.6
1,846,426	-		DDA3937_RS08150	0.69	-0.6
1,846,426	-		DDA3937_RS08150	0.69	-1.6
1,846,426	-		DDA3937_RS08150	0.69	-0.1
1,846,447	+		DDA3937_RS08150	0.72	-1.3
1,846,447	+		DDA3937_RS08150	0.72	+0.6
1,846,447	+		DDA3937_RS08150	0.72	-1.7
1,846,447	+		DDA3937_RS08150	0.72	+1.1
1,846,447	+		DDA3937_RS08150	0.72	-0.0
1,846,448	-		DDA3937_RS08150	0.72	+1.6
1,846,448	-		DDA3937_RS08150	0.72	-0.6
1,846,448	-		DDA3937_RS08150	0.72	-1.1
1,846,448	-		DDA3937_RS08150	0.72	+0.3
1,846,532	+		DDA3937_RS08150	0.81	-0.7
1,846,645	+				-0.9
1,846,645	+				-0.6
1,846,646	-				+0.7
1,846,646	-				-0.6
1,846,646	-				+0.6
1,846,646	-				+1.7
1,846,739	+				-0.0
1,846,740	-				+1.7
1,846,794	+		DDA3937_RS08155	0.11	-1.3
1,846,794	+		DDA3937_RS08155	0.11	-0.3
1,846,795	-		DDA3937_RS08155	0.11	+0.3