Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08100

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,836,537	-		DDA3937_RS08095	0.44	-0.3
1,836,549	+		DDA3937_RS08095	0.45	-0.9
1,836,549	+		DDA3937_RS08095	0.45	-0.2
1,836,549	+		DDA3937_RS08095	0.45	+0.4
1,836,549	+		DDA3937_RS08095	0.45	-2.1
1,836,549	+		DDA3937_RS08095	0.45	-0.1
1,836,550	-		DDA3937_RS08095	0.45	+0.4
1,836,550	-		DDA3937_RS08095	0.45	+0.1
1,836,575	+		DDA3937_RS08095	0.46	+0.3
1,836,627	+		DDA3937_RS08095	0.49	+1.3
1,836,765	+		DDA3937_RS08095	0.58	-0.3
1,836,765	+		DDA3937_RS08095	0.58	-0.9
1,836,765	+		DDA3937_RS08095	0.58	+0.3
1,836,765	+		DDA3937_RS08095	0.58	-0.6
1,836,765	+		DDA3937_RS08095	0.58	-0.2
1,836,765	+		DDA3937_RS08095	0.58	+1.1
1,836,765	+		DDA3937_RS08095	0.58	+1.1
1,836,765	+		DDA3937_RS08095	0.58	+0.7
1,836,765	+		DDA3937_RS08095	0.58	+2.1
1,836,766	-		DDA3937_RS08095	0.58	+0.0
1,836,766	-		DDA3937_RS08095	0.58	-0.3
1,836,766	-		DDA3937_RS08095	0.58	-0.4
1,836,766	-		DDA3937_RS08095	0.58	+0.1
1,836,766	-		DDA3937_RS08095	0.58	+0.2
1,836,766	-		DDA3937_RS08095	0.58	+1.0
1,836,766	-		DDA3937_RS08095	0.58	+0.3
1,836,852	+		DDA3937_RS08095	0.63	-0.4
1,836,863	+		DDA3937_RS08095	0.64	+1.7
1,836,864	-		DDA3937_RS08095	0.64	+0.4
1,836,864	-		DDA3937_RS08095	0.64	-1.1
1,836,864	-		DDA3937_RS08095	0.64	-0.1
1,836,864	-		DDA3937_RS08095	0.64	+0.0
1,836,864	-		DDA3937_RS08095	0.64	-0.8
1,837,164	+		DDA3937_RS08095	0.82	+0.3
1,837,210	-		DDA3937_RS08095	0.84	+0.4
1,837,226	+		DDA3937_RS08095	0.85	+0.5
1,837,227	-		DDA3937_RS08095	0.86	+0.2
1,837,434	+				+0.6
1,837,434	+				-0.2
1,837,465	-				-1.0
1,837,609	+		DDA3937_RS08100	0.17	-0.9
1,837,775	+		DDA3937_RS08100	0.36	+0.6
1,837,916	+		DDA3937_RS08100	0.52	+2.1
1,837,916	+		DDA3937_RS08100	0.52	+0.3
1,837,917	-		DDA3937_RS08100	0.52	+0.4
1,838,082	-		DDA3937_RS08100	0.72	+0.3
1,838,099	+		DDA3937_RS08100	0.74	+0.4
1,838,222	+		DDA3937_RS08100	0.88	-0.7
1,838,240	-				+0.4
1,838,284	+				+0.3
1,838,314	+				+0.7
1,838,315	-				-1.1
1,838,315	-				-1.6
1,838,316	+				-0.5
1,838,317	-				-0.2
1,838,322	+				+0.4
1,838,322	+				+0.5
1,838,323	-				+0.5
1,838,323	-				+0.3
1,838,333	+				+0.1
1,838,333	+				+0.0
1,838,345	+				-0.3
1,838,345	+				-0.1
1,838,345	+				-0.0
1,838,345	+				-0.0
1,838,345	+				-1.9
1,838,345	+				-0.9
1,838,345	+				+0.1
1,838,345	+				-0.3
1,838,345	+				-1.6
1,838,345	+				+0.5
1,838,345	+				-0.3
1,838,345	+				-0.2
1,838,345	+				-2.1
1,838,345	+				-0.0
1,838,345	+				-0.4
1,838,345	+				-1.3
1,838,345	+				-0.1
1,838,345	+				+0.5
1,838,345	+				+1.1
1,838,345	+				-0.1
1,838,345	+				-1.5
1,838,345	+				-1.7
1,838,345	+				+0.2
1,838,345	+				+0.1
1,838,345	+				-0.3
1,838,345	+				-1.1
1,838,345	+				-0.3
1,838,346	-				-0.4
1,838,346	-				+1.1
1,838,346	-				+0.5
1,838,346	-				-0.3
1,838,346	-				-1.0
1,838,346	-				-0.6
1,838,346	-				+0.4
1,838,346	-				-2.1
1,838,346	-				-0.4
1,838,346	-				-2.1
1,838,346	-				-0.4
1,838,346	-				-0.6
1,838,346	-				-0.2
1,838,346	-				-1.1
1,838,346	-				-1.5
1,838,346	-				-0.8
1,838,415	-		DDA3937_RS08105	0.27	+0.7
1,838,574	-		DDA3937_RS08105	0.80	+1.4
1,838,655	+				+0.3
1,838,655	+				-1.2
1,838,655	+				-0.5
1,838,655	+				-1.6
1,838,656	-				+0.0
1,838,656	-				+0.2
1,838,929	-		DDA3937_RS08110	0.36	+0.8
1,839,043	+		DDA3937_RS08110	0.50	-0.4
1,839,093	+		DDA3937_RS08110	0.56	-1.3
1,839,121	+		DDA3937_RS08110	0.59	-1.0
1,839,121	+		DDA3937_RS08110	0.59	+0.5
1,839,121	+				+1.3
1,839,122	-		DDA3937_RS08110	0.59	-0.9
1,839,122	-		DDA3937_RS08110	0.59	-0.6
1,839,199	+		DDA3937_RS08110	0.69	-0.3
1,839,222	+		DDA3937_RS08110	0.71	+0.4