Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,830,847	+		DDA3937_RS08075	0.25	+0.1
1,830,847	+		DDA3937_RS08075	0.25	+0.3
1,830,847	+		DDA3937_RS08075	0.25	-1.0
1,830,847	+		DDA3937_RS08075	0.25	-0.6
1,830,847	+		DDA3937_RS08075	0.25	+0.4
1,830,847	+		DDA3937_RS08075	0.25	-0.3
1,830,847	+		DDA3937_RS08075	0.25	+0.2
1,830,848	-		DDA3937_RS08075	0.25	-0.3
1,831,113	-		DDA3937_RS08075	0.52	-0.6
1,831,113	-		DDA3937_RS08075	0.52	-0.8
1,831,196	-		DDA3937_RS08075	0.61	-0.0
1,831,450	+		DDA3937_RS08075	0.87	-0.4
1,831,450	+		DDA3937_RS08075	0.87	+0.2
1,831,450	+		DDA3937_RS08075	0.87	+0.8
1,831,451	-		DDA3937_RS08075	0.87	-0.3
1,831,451	-		DDA3937_RS08075	0.87	-0.2
1,831,451	-		DDA3937_RS08075	0.87	-1.4
1,831,552	+				-0.7
1,831,552	+				-1.5
1,831,552	+				+0.1
1,831,553	-				+0.1
1,831,634	-				+0.2
1,831,636	-				-0.9
1,831,719	+				+0.3
1,831,720	-				-0.7
1,831,720	-				-0.6
1,831,720	-				-0.8
1,831,727	-				-0.3
1,831,751	+				-0.3
1,831,910	+		DDA3937_RS08080	0.22	-1.7
1,831,910	+		DDA3937_RS08080	0.22	+0.1
1,831,910	+		DDA3937_RS08080	0.22	+0.6
1,831,910	+		DDA3937_RS08080	0.22	+0.4
1,831,911	-		DDA3937_RS08080	0.22	+0.1
1,831,911	-		DDA3937_RS08080	0.22	+0.2
1,831,911	-		DDA3937_RS08080	0.22	+0.1
1,831,911	-		DDA3937_RS08080	0.22	-2.6
1,831,911	-		DDA3937_RS08080	0.22	+0.7
1,831,911	-		DDA3937_RS08080	0.22	-0.9
1,832,078	+		DDA3937_RS08080	0.49	-1.2
1,832,078	+		DDA3937_RS08080	0.49	-0.0
1,832,079	-		DDA3937_RS08080	0.49	-0.5
1,832,107	+		DDA3937_RS08080	0.53	-1.6
1,832,107	+		DDA3937_RS08080	0.53	-0.0
1,832,107	+		DDA3937_RS08080	0.53	-1.4
1,832,218	+		DDA3937_RS08080	0.71	-1.5
1,832,219	-		DDA3937_RS08080	0.71	-0.2
1,832,249	-		DDA3937_RS08080	0.76	-0.8
1,832,249	-				+1.1
1,832,379	-				-0.4
1,832,393	+				+0.3
1,832,394	-				-0.6
1,832,394	-				+0.2
1,832,400	+				-0.8
1,832,400	+				-0.6
1,832,401	-				+0.7
1,832,401	-				-0.0
1,832,401	-				+1.0
1,832,401	-				-0.6
1,832,403	+				-1.6
1,832,410	-				-0.3
1,832,443	+				-0.9
1,832,444	-				-0.7
1,832,479	+				-0.5
1,832,480	-				-0.9
1,832,480	-				-1.0
1,832,480	-				-0.2
1,832,517	+				-0.6
1,832,517	+				-0.3
1,832,517	+				-0.4
1,832,519	+				-0.7
1,832,520	-				-1.9
1,832,520	-				-0.3
1,832,520	-				+0.1
1,832,521	+				-0.7
1,832,521	+				+0.4
1,832,522	-				-0.7
1,832,572	-				-0.1
1,832,615	+				-0.1
1,832,615	+				-1.3
1,832,616	-		DDA3937_RS08085	0.10	+0.2
1,832,723	-		DDA3937_RS08085	0.19	-0.2
1,832,737	+		DDA3937_RS08085	0.20	-0.0
1,832,737	+		DDA3937_RS08085	0.20	+0.7
1,832,738	-		DDA3937_RS08085	0.20	-0.7
1,832,780	-		DDA3937_RS08085	0.24	+0.4
1,832,952	+		DDA3937_RS08085	0.38	-1.1
1,833,044	-		DDA3937_RS08085	0.45	-1.3
1,833,130	-		DDA3937_RS08085	0.52	+0.1
1,833,131	+		DDA3937_RS08085	0.53	-1.4
1,833,131	+		DDA3937_RS08085	0.53	-0.5
1,833,132	-		DDA3937_RS08085	0.53	+0.5
1,833,161	+		DDA3937_RS08085	0.55	-0.4
1,833,161	+		DDA3937_RS08085	0.55	-1.0
1,833,162	-		DDA3937_RS08085	0.55	+0.7
1,833,200	+		DDA3937_RS08085	0.58	-1.3
1,833,237	-		DDA3937_RS08085	0.61	-1.3
1,833,267	+		DDA3937_RS08085	0.64	-0.5
1,833,343	+		DDA3937_RS08085	0.70	-1.1