Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,796,558	+		DDA3937_RS07930	0.64	-1.3
1,796,559	-		DDA3937_RS07930	0.64	-0.5
1,796,559	-		DDA3937_RS07930	0.64	-1.2
1,796,685	-		DDA3937_RS07930	0.78	+0.9
1,796,776	+		DDA3937_RS07930	0.89	-1.6
1,796,853	+				-2.8
1,796,879	-				+0.0
1,796,961	-				-0.2
1,796,964	+				-1.1
1,797,007	+				-0.8
1,797,051	-				+0.0
1,797,063	-				+0.1
1,797,175	-				-0.2
1,797,230	+				-0.2
1,797,231	-				-0.1
1,797,260	+				+1.1
1,797,261	-				+0.0
1,797,272	+				-0.4
1,797,287	-				+1.3
1,797,313	+				-1.0
1,797,313	+				-0.2
1,797,314	-				-0.7
1,797,345	+				-0.7
1,797,345	+				-0.2
1,797,346	-				-0.2
1,797,346	-				-2.4
1,797,410	-				-1.2
1,797,435	+				+3.8
1,797,457	-				+0.5
1,797,635	-		DDA3937_RS07935	0.22	-0.8
1,797,695	+		DDA3937_RS07935	0.28	-0.7
1,797,695	+		DDA3937_RS07935	0.28	+0.2
1,797,696	-		DDA3937_RS07935	0.28	-1.2
1,797,696	-		DDA3937_RS07935	0.28	-0.8
1,797,715	+		DDA3937_RS07935	0.30	+0.0
1,797,782	+		DDA3937_RS07935	0.37	+0.2
1,797,782	+				+2.1
1,797,782	+		DDA3937_RS07935	0.37	+0.3
1,797,783	-		DDA3937_RS07935	0.37	-0.4
1,797,783	-		DDA3937_RS07935	0.37	+0.8
1,797,931	+		DDA3937_RS07935	0.51	+0.4
1,797,931	+		DDA3937_RS07935	0.51	+0.9
1,798,141	+		DDA3937_RS07935	0.72	-1.2
1,798,141	+		DDA3937_RS07935	0.72	-0.7
1,798,142	-		DDA3937_RS07935	0.72	-1.4
1,798,144	+		DDA3937_RS07935	0.72	+0.3
1,798,145	-		DDA3937_RS07935	0.72	-1.3
1,798,149	+		DDA3937_RS07935	0.73	+1.0
1,798,200	-		DDA3937_RS07935	0.78	-0.1
1,798,200	-		DDA3937_RS07935	0.78	-0.4
1,798,200	-		DDA3937_RS07935	0.78	+0.4
1,798,200	-		DDA3937_RS07935	0.78	-0.1
1,798,200	-		DDA3937_RS07935	0.78	-0.5
1,798,200	-		DDA3937_RS07935	0.78	-0.1
1,798,200	-		DDA3937_RS07935	0.78	+1.3
1,798,200	-		DDA3937_RS07935	0.78	+1.4
1,798,202	-		DDA3937_RS07935	0.78	-1.1
1,798,284	+		DDA3937_RS07935	0.86	+0.3
1,798,347	-				-1.8
1,798,367	-				-1.1
1,798,427	-				+0.8
1,798,427	-				-1.1
1,798,441	-				+0.8
1,798,460	-				-1.0
1,798,463	+				-0.2
1,798,555	+				+0.4
1,798,555	+				-0.2
1,798,555	+				-0.1
1,798,556	-				+0.3
1,798,948	-		DDA3937_RS07940	0.19	+0.2
1,798,948	-		DDA3937_RS07940	0.19	-0.7
1,798,948	-		DDA3937_RS07940	0.19	-2.6
1,799,031	+		DDA3937_RS07940	0.22	-1.5
1,799,039	+		DDA3937_RS07940	0.23	-0.4
1,799,060	-		DDA3937_RS07940	0.24	-0.2
1,799,060	-		DDA3937_RS07940	0.24	-0.5
1,799,130	+		DDA3937_RS07940	0.27	-0.2
1,799,223	+		DDA3937_RS07940	0.31	-0.2
1,799,224	-		DDA3937_RS07940	0.31	-1.6
1,799,224	-		DDA3937_RS07940	0.31	-1.1
1,799,230	+		DDA3937_RS07940	0.31	-0.6
1,799,230	+		DDA3937_RS07940	0.31	-0.1
1,799,231	-		DDA3937_RS07940	0.31	-1.5
1,799,231	-		DDA3937_RS07940	0.31	-1.2
1,799,231	-		DDA3937_RS07940	0.31	-0.9
1,799,331	+		DDA3937_RS07940	0.35	-0.7