Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,795,301	+				-0.0
1,795,301	+				-0.6
1,795,301	+				-2.2
1,795,301	+				+0.0
1,795,301	+				+0.2
1,795,302	-				-0.7
1,795,302	-				+1.0
1,795,302	-				-0.8
1,795,302	-				+0.1
1,795,302	-				+0.5
1,795,302	-				+0.3
1,795,302	-				+0.8
1,795,302	-				-1.8
1,795,388	+		DDA3937_RS07925	0.13	-0.1
1,795,388	+		DDA3937_RS07925	0.13	-0.4
1,795,389	-		DDA3937_RS07925	0.13	-0.4
1,795,389	-		DDA3937_RS07925	0.13	-0.4
1,795,389	-		DDA3937_RS07925	0.13	+0.8
1,795,389	-		DDA3937_RS07925	0.13	-0.4
1,795,392	+		DDA3937_RS07925	0.13	+0.3
1,795,392	+		DDA3937_RS07925	0.13	+0.1
1,795,393	-		DDA3937_RS07925	0.13	-1.3
1,795,393	-		DDA3937_RS07925	0.13	+0.3
1,795,454	-		DDA3937_RS07925	0.22	-0.3
1,795,735	-		DDA3937_RS07925	0.62	+0.2
1,795,890	-		DDA3937_RS07925	0.84	-0.8
1,795,890	-		DDA3937_RS07925	0.84	+0.3
1,795,890	-		DDA3937_RS07925	0.84	-2.2
1,795,983	+				+0.7
1,795,983	+				+0.4
1,795,983	+				-2.6
1,795,984	-				+0.3
1,795,984	-				+0.8
1,795,984	-				-1.5
1,795,998	+				-0.8
1,795,998	+				-1.0
1,795,998	+				-0.8
1,795,999	-				-0.0
1,795,999	-				+0.3
1,796,002	-				+1.0
1,796,558	+		DDA3937_RS07930	0.64	-1.3
1,796,559	-		DDA3937_RS07930	0.64	-0.5
1,796,559	-		DDA3937_RS07930	0.64	-1.2
1,796,685	-		DDA3937_RS07930	0.78	+0.9
1,796,776	+		DDA3937_RS07930	0.89	-1.6
1,796,853	+				-2.8
1,796,879	-				+0.0
1,796,961	-				-0.2
1,796,964	+				-1.1
1,797,007	+				-0.8
1,797,051	-				+0.0
1,797,063	-				+0.1
1,797,175	-				-0.2
1,797,230	+				-0.2
1,797,231	-				-0.1
1,797,260	+				+1.1
1,797,261	-				+0.0
1,797,272	+				-0.4
1,797,287	-				+1.3
1,797,313	+				-1.0
1,797,313	+				-0.2
1,797,314	-				-0.7
1,797,345	+				-0.7
1,797,345	+				-0.2
1,797,346	-				-0.2
1,797,346	-				-2.4
1,797,410	-				-1.2
1,797,435	+				+3.8
1,797,457	-				+0.5
1,797,635	-		DDA3937_RS07935	0.22	-0.8
1,797,695	+		DDA3937_RS07935	0.28	-0.7
1,797,695	+		DDA3937_RS07935	0.28	+0.2
1,797,696	-		DDA3937_RS07935	0.28	-1.2
1,797,696	-		DDA3937_RS07935	0.28	-0.8
1,797,715	+		DDA3937_RS07935	0.30	+0.0
1,797,782	+		DDA3937_RS07935	0.37	+0.2
1,797,782	+				+2.1
1,797,782	+		DDA3937_RS07935	0.37	+0.3
1,797,783	-		DDA3937_RS07935	0.37	-0.4
1,797,783	-		DDA3937_RS07935	0.37	+0.8