Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07855

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,776,966	+		DDA3937_RS07850	0.73	+0.4
1,777,076	-		DDA3937_RS07850	0.77	-0.8
1,777,076	-		DDA3937_RS07850	0.77	+0.2
1,777,076	-		DDA3937_RS07850	0.77	-1.8
1,777,076	-		DDA3937_RS07850	0.77	-0.7
1,777,291	+		DDA3937_RS07850	0.84	+0.0
1,777,292	-		DDA3937_RS07850	0.84	-0.4
1,777,292	-		DDA3937_RS07850	0.84	+1.2
1,777,292	-		DDA3937_RS07850	0.84	+0.1
1,777,292	-		DDA3937_RS07850	0.84	-1.2
1,777,302	-		DDA3937_RS07850	0.84	-0.2
1,777,348	-		DDA3937_RS07850	0.85	-0.6
1,777,412	-		DDA3937_RS07850	0.88	-0.6
1,777,426	+		DDA3937_RS07850	0.88	+1.3
1,777,426	+		DDA3937_RS07850	0.88	+0.0
1,777,426	+		DDA3937_RS07850	0.88	+0.9
1,777,427	-		DDA3937_RS07850	0.88	+0.8
1,777,427	-		DDA3937_RS07850	0.88	+0.8
1,777,427	-		DDA3937_RS07850	0.88	-0.3
1,777,427	-		DDA3937_RS07850	0.88	+0.2
1,777,579	+				+0.7
1,777,757	-				+0.6
1,777,789	+				-1.5
1,777,790	-				-0.7
1,777,803	+				+0.1
1,777,803	+				-0.8
1,777,824	+				-0.7
1,777,824	+				-1.3
1,777,824	+				-1.8
1,777,825	-				-1.2
1,777,825	-				-0.6
1,777,828	-				-0.2
1,777,881	+				+1.3
1,777,882	-				+0.0
1,777,929	+		DDA3937_RS07855	0.14	-1.4
1,777,999	+		DDA3937_RS07855	0.21	-0.5
1,778,104	-		DDA3937_RS07855	0.33	-0.5
1,778,104	-		DDA3937_RS07855	0.33	-0.7
1,778,165	-		DDA3937_RS07855	0.40	-1.9
1,778,203	-		DDA3937_RS07855	0.44	-1.1
1,778,252	+		DDA3937_RS07855	0.49	-1.0
1,778,253	-		DDA3937_RS07855	0.49	-0.5
1,778,256	+		DDA3937_RS07855	0.50	-0.6
1,778,256	+		DDA3937_RS07855	0.50	-0.8
1,778,257	-		DDA3937_RS07855	0.50	+0.9
1,778,257	-		DDA3937_RS07855	0.50	-0.1
1,778,257	-		DDA3937_RS07855	0.50	-1.3
1,778,257	-		DDA3937_RS07855	0.50	-0.1
1,778,257	-		DDA3937_RS07855	0.50	-0.8
1,778,257	-		DDA3937_RS07855	0.50	-1.7
1,778,275	+		DDA3937_RS07855	0.52	-0.8
1,778,276	-		DDA3937_RS07855	0.52	+0.3
1,778,444	-		DDA3937_RS07855	0.70	-0.4
1,778,479	+		DDA3937_RS07855	0.74	+0.2
1,778,479	+		DDA3937_RS07855	0.74	-0.7
1,778,479	+				+0.8
1,778,480	-		DDA3937_RS07855	0.74	-0.0
1,778,480	-		DDA3937_RS07855	0.74	+0.9
1,778,480	-		DDA3937_RS07855	0.74	-1.3
1,778,480	-		DDA3937_RS07855	0.74	-0.9
1,778,480	-		DDA3937_RS07855	0.74	+0.3
1,778,480	-		DDA3937_RS07855	0.74	+0.3
1,778,480	-		DDA3937_RS07855	0.74	-0.8
1,778,480	-		DDA3937_RS07855	0.74	-0.5
1,778,480	-		DDA3937_RS07855	0.74	+0.8
1,778,480	-		DDA3937_RS07855	0.74	-1.4
1,778,512	+		DDA3937_RS07855	0.78	-1.6
1,778,629	+				-0.8
1,778,629	+				+0.1
1,778,629	+				+0.3
1,778,630	-				+0.2
1,778,630	-				-0.8
1,778,700	+				-0.1
1,778,700	+				+0.5
1,778,701	-				+0.4
1,778,701	-				-1.8
1,778,701	-				-1.8
1,778,701	-				-0.8
1,778,701	-				-0.0
1,778,711	-				+1.1
1,778,741	-				-0.8
1,778,848	+		DDA3937_RS07860	0.22	+0.8
1,779,025	+		DDA3937_RS07860	0.50	-1.7
1,779,025	+		DDA3937_RS07860	0.50	-1.1
1,779,026	-		DDA3937_RS07860	0.50	+2.2
1,779,029	+		DDA3937_RS07860	0.50	-1.2
1,779,029	+		DDA3937_RS07860	0.50	-0.2
1,779,029	+		DDA3937_RS07860	0.50	+1.2
1,779,029	+		DDA3937_RS07860	0.50	+0.8
1,779,029	+		DDA3937_RS07860	0.50	-0.3
1,779,029	+		DDA3937_RS07860	0.50	-0.1
1,779,029	+		DDA3937_RS07860	0.50	+0.8
1,779,030	-		DDA3937_RS07860	0.51	-1.2
1,779,030	-		DDA3937_RS07860	0.51	-2.4
1,779,030	-		DDA3937_RS07860	0.51	+0.2
1,779,030	-		DDA3937_RS07860	0.51	-0.3
1,779,030	-		DDA3937_RS07860	0.51	-0.1
1,779,030	-		DDA3937_RS07860	0.51	-0.1
1,779,030	-		DDA3937_RS07860	0.51	+0.5
1,779,031	+		DDA3937_RS07860	0.51	+0.2
1,779,032	-		DDA3937_RS07860	0.51	-0.3
1,779,172	+		DDA3937_RS07860	0.73	+0.2
1,779,215	+		DDA3937_RS07860	0.79	+0.2
1,779,215	+		DDA3937_RS07860	0.79	-0.2
1,779,215	+		DDA3937_RS07860	0.79	-0.9
1,779,215	+		DDA3937_RS07860	0.79	+0.8
1,779,215	+		DDA3937_RS07860	0.79	+1.2
1,779,215	+		DDA3937_RS07860	0.79	-0.0
1,779,215	+		DDA3937_RS07860	0.79	-1.1
1,779,215	+		DDA3937_RS07860	0.79	-0.0
1,779,215	+		DDA3937_RS07860	0.79	+0.4
1,779,215	+		DDA3937_RS07860	0.79	-0.4
1,779,215	+		DDA3937_RS07860	0.79	+0.6
1,779,216	-		DDA3937_RS07860	0.80	+2.2
1,779,216	-		DDA3937_RS07860	0.80	+0.4
1,779,216	-		DDA3937_RS07860	0.80	-0.3
1,779,216	-		DDA3937_RS07860	0.80	-1.2
1,779,216	-		DDA3937_RS07860	0.80	+0.2
1,779,216	-		DDA3937_RS07860	0.80	-2.7
1,779,216	-		DDA3937_RS07860	0.80	-0.6
1,779,216	-		DDA3937_RS07860	0.80	-1.0
1,779,216	-		DDA3937_RS07860	0.80	-1.6
1,779,216	-		DDA3937_RS07860	0.80	-0.6
1,779,216	-		DDA3937_RS07860	0.80	-0.6
1,779,216	-		DDA3937_RS07860	0.80	+1.0
1,779,337	+				-2.2
1,779,337	+				+0.0
1,779,338	-				+2.9
1,779,344	+				-0.2
1,779,344	+				-0.2
1,779,344	+				-0.7
1,779,344	+				-0.2
1,779,370	+				+0.8
1,779,375	-				-0.5
1,779,375	-				-0.6
1,779,577	-				-2.0