Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07440

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,677,821	-		DDA3937_RS07430	0.59	-2.9
1,677,821	-		DDA3937_RS07430	0.59	+0.9
1,677,896	-		DDA3937_RS07430	0.78	-1.6
1,677,898	+		DDA3937_RS07430	0.78	+0.6
1,677,898	+		DDA3937_RS07430	0.78	-0.2
1,677,898	+		DDA3937_RS07430	0.78	-0.6
1,677,898	+		DDA3937_RS07430	0.78	-0.8
1,677,899	-		DDA3937_RS07430	0.79	-0.0
1,677,899	-		DDA3937_RS07430	0.79	+0.5
1,677,899	-		DDA3937_RS07430	0.79	-0.9
1,677,899	-		DDA3937_RS07430	0.79	+0.6
1,677,899	-		DDA3937_RS07430	0.79	-0.1
1,677,899	-				-0.8
1,677,899	-		DDA3937_RS07430	0.79	-1.1
1,677,899	-		DDA3937_RS07430	0.79	-2.0
1,677,924	+		DDA3937_RS07430	0.85	+1.1
1,677,965	-				+0.8
1,678,015	-				-0.6
1,678,015	-				-0.0
1,678,062	+		DDA3937_RS07435	0.10	+0.1
1,678,062	+		DDA3937_RS07435	0.10	+0.4
1,678,062	+		DDA3937_RS07435	0.10	-2.0
1,678,063	-		DDA3937_RS07435	0.10	-1.6
1,678,314	+		DDA3937_RS07435	0.42	-0.3
1,678,315	-		DDA3937_RS07435	0.42	+0.1
1,678,315	-		DDA3937_RS07435	0.42	+0.0
1,678,353	+		DDA3937_RS07435	0.47	+0.2
1,678,353	+		DDA3937_RS07435	0.47	+1.3
1,678,353	+		DDA3937_RS07435	0.47	-0.4
1,678,353	+		DDA3937_RS07435	0.47	-1.0
1,678,354	-		DDA3937_RS07435	0.47	+0.9
1,678,354	-		DDA3937_RS07435	0.47	-0.6
1,678,354	-		DDA3937_RS07435	0.47	-0.1
1,678,354	-		DDA3937_RS07435	0.47	-1.5
1,678,354	-		DDA3937_RS07435	0.47	-0.5
1,678,354	-		DDA3937_RS07435	0.47	-0.3
1,678,354	-		DDA3937_RS07435	0.47	+0.0
1,678,354	-		DDA3937_RS07435	0.47	+0.4
1,678,399	-				-0.2
1,678,399	-		DDA3937_RS07435	0.53	-1.1
1,678,399	-		DDA3937_RS07435	0.53	+1.2
1,678,441	-		DDA3937_RS07435	0.58	+1.0
1,678,477	-		DDA3937_RS07435	0.63	-2.1
1,678,597	+		DDA3937_RS07435	0.78	-0.0
1,678,659	+		DDA3937_RS07435	0.86	-0.8
1,678,660	-		DDA3937_RS07435	0.86	+0.8
1,678,733	-				-2.5
1,678,740	+				+0.3
1,678,740	+				+0.1
1,678,741	-				-0.2
1,678,765	+				+1.0
1,678,765	+				-0.8
1,678,765	+				+1.4
1,678,766	-				-1.4
1,678,766	-				+0.3
1,678,766	-				+0.6
1,678,766	-				-0.6
1,678,766	-				-1.0
1,678,943	+		DDA3937_RS07440	0.31	-1.2
1,678,944	-		DDA3937_RS07440	0.31	-0.6
1,678,944	-		DDA3937_RS07440	0.31	-0.2
1,678,944	-		DDA3937_RS07440	0.31	-1.2
1,679,199	+		DDA3937_RS07440	0.76	-0.4
1,679,199	+		DDA3937_RS07440	0.76	-0.7
1,679,200	-		DDA3937_RS07440	0.76	-0.2
1,679,217	+		DDA3937_RS07440	0.79	-0.8
1,679,234	+		DDA3937_RS07440	0.82	-0.9
1,679,285	+				+1.3
1,679,285	+				+0.4
1,679,285	+				-0.5
1,679,286	-				-0.6
1,679,331	+				-0.4
1,679,331	+				-0.7
1,679,382	+				+0.5
1,679,400	+				-0.1
1,679,400	+				+0.1
1,679,463	+				+0.4
1,679,463	+				-0.5
1,679,463	+				+1.2
1,679,524	+		DDA3937_RS07445	0.10	-0.5
1,679,525	-		DDA3937_RS07445	0.10	-0.1
1,679,525	-		DDA3937_RS07445	0.10	-0.4
1,679,675	-		DDA3937_RS07445	0.19	+0.1
1,679,675	-		DDA3937_RS07445	0.19	-0.2
1,679,741	-		DDA3937_RS07445	0.23	-0.1
1,679,776	-		DDA3937_RS07445	0.25	-0.2
1,679,889	-		DDA3937_RS07445	0.31	+0.3
1,679,899	-		DDA3937_RS07445	0.32	+0.8
1,679,974	+		DDA3937_RS07445	0.36	-1.2
1,680,084	+		DDA3937_RS07445	0.43	-0.5
1,680,085	-		DDA3937_RS07445	0.43	+0.5
1,680,250	+		DDA3937_RS07445	0.52	-0.2
1,680,303	+		DDA3937_RS07445	0.55	+1.2