Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07165

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,614,499	+		DDA3937_RS07160	0.38	+0.2
1,614,500	-		DDA3937_RS07160	0.38	-0.6
1,614,500	-		DDA3937_RS07160	0.38	-0.1
1,614,500	-		DDA3937_RS07160	0.38	-0.8
1,614,546	+		DDA3937_RS07160	0.42	+0.9
1,614,547	-		DDA3937_RS07160	0.42	-1.6
1,614,547	-		DDA3937_RS07160	0.42	-1.1
1,614,547	-		DDA3937_RS07160	0.42	+0.5
1,614,756	+		DDA3937_RS07160	0.58	-0.9
1,614,757	-		DDA3937_RS07160	0.58	-1.5
1,615,165	+				-0.2
1,615,165	+				+0.5
1,615,166	-				+0.1
1,615,166	-				+0.5
1,615,244	-				-0.5
1,615,244	-				-2.6
1,615,264	-				+0.5
1,615,264	-				-0.8
1,615,282	+				+0.4
1,615,283	-				-1.2
1,615,283	-				-0.0
1,615,292	+				-0.4
1,615,292	+				+0.3
1,615,312	+				+1.6
1,615,377	+				-1.0
1,615,378	-				+1.4
1,615,378	-				+0.1
1,615,400	+				+0.8
1,615,427	+				-0.5
1,615,516	-		DDA3937_RS07165	0.14	-0.4
1,615,615	+		DDA3937_RS07165	0.27	-0.6
1,615,615	+		DDA3937_RS07165	0.27	-0.4
1,615,615	+		DDA3937_RS07165	0.27	+0.6
1,615,615	+		DDA3937_RS07165	0.27	-0.5
1,615,615	+		DDA3937_RS07165	0.27	-0.7
1,615,615	+		DDA3937_RS07165	0.27	-2.2
1,615,615	+		DDA3937_RS07165	0.27	-1.2
1,615,616	-		DDA3937_RS07165	0.27	-0.2
1,615,616	-		DDA3937_RS07165	0.27	-0.2
1,615,685	+		DDA3937_RS07165	0.36	-0.5
1,615,686	-		DDA3937_RS07165	0.37	-0.9
1,615,686	-		DDA3937_RS07165	0.37	-0.6
1,615,686	-		DDA3937_RS07165	0.37	+0.1
1,615,749	+		DDA3937_RS07165	0.45	-1.2
1,615,749	+		DDA3937_RS07165	0.45	-0.4
1,615,750	-		DDA3937_RS07165	0.45	-0.6
1,615,860	-		DDA3937_RS07165	0.60	+0.1
1,616,240	+				+0.0
1,616,240	+				+0.6
1,616,240	+				+0.8
1,616,240	+				+0.8
1,616,241	-				-0.4
1,616,241	-				-1.3
1,616,241	-				-0.3
1,616,241	-				-0.4
1,616,241	-				+1.2
1,616,241	-				+0.8
1,616,249	+				+0.8
1,616,250	-				+0.0
1,616,266	+		DDA3937_RS07170	0.10	-0.8
1,616,266	+		DDA3937_RS07170	0.10	-0.3
1,616,267	-		DDA3937_RS07170	0.10	-0.2
1,616,267	-		DDA3937_RS07170	0.10	+1.1
1,616,267	-		DDA3937_RS07170	0.10	-1.7
1,616,267	-		DDA3937_RS07170	0.10	+0.0
1,616,267	-		DDA3937_RS07170	0.10	+0.3
1,616,301	+		DDA3937_RS07170	0.13	-0.2
1,616,302	-		DDA3937_RS07170	0.13	-1.3
1,616,377	+		DDA3937_RS07170	0.20	-1.2
1,616,481	-		DDA3937_RS07170	0.29	-1.2
1,616,518	+		DDA3937_RS07170	0.33	+0.2
1,616,519	-		DDA3937_RS07170	0.33	-1.4
1,616,521	+		DDA3937_RS07170	0.33	-0.0
1,616,521	+		DDA3937_RS07170	0.33	+0.2
1,616,522	-		DDA3937_RS07170	0.33	-0.1
1,616,842	+		DDA3937_RS07170	0.61	-0.5
1,616,871	+		DDA3937_RS07170	0.64	+1.3
1,616,872	-		DDA3937_RS07170	0.64	-2.5